Resource

Id Histone_ChIP-seq/ENCSR698CKZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR698CKZ [biosample_summary="Homo sapiens MM.1S" and target="H2AFZ"]
Description
Labels
  • accession: ENCSR698CKZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005724/
  • biosample_summary: Homo sapiens MM.1S
  • date_created: 2014-10-24T16:16:09.667351+00:00
  • date_released: 2016-10-05
  • doi: 10.17989/ENCSR698CKZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2AFZ

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR698CKZ float

Histone_ChIP-seq_ENCSR698CKZ
Histone_ChIP-seq ENCSR698CKZ [biosample_summary="Homo sapiens MM.1S" and target="H2AFZ"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR698CKZ [1.55, 14.9]
n
39,596,530
mean
4.87
sd
1.86

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 395965301.23% 52251
chr1 3999374 1.61% 5139
chr2 3166124 1.31% 4089
chr3 2811859 1.42% 3570
chr4 2026251 1.07% 2632
chr5 2205232 1.21% 2868
chr6 2296122 1.34% 2991
chr7 2201969 1.38% 2934
chr8 1556256 1.07% 2090
chr9 1559260 1.13% 2084
chr10 1842055 1.38% 2381
chr11 2057158 1.52% 2724
chr12 2032440 1.52% 2635
chr13 712497 0.62% 1035
chr14 746159 0.70% 1129
chr15 1420715 1.39% 1848
chr16 1186221 1.31% 1634
chr17 1840193 2.21% 2444
chr18 814685 1.01% 1104
chr19 1609777 2.75% 2141
chr20 1084075 1.68% 1468
chr21 506866 1.09% 651
chr22 759318 1.49% 1010
chrX 1161924 0.74% 1650
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 52251 188 4967 757.81 646
global segment-length histogram

Files

Filename Size md5
ENCFF579KBY.bed.gz 1.3 MB 6cc58ef4f9dcd075f4ac64aa1c86f8c7
ENCFF579KBY.tabix.bed.gz 571.46 KB 2dba6e525929022a2a6469b99b5ccf10
ENCFF579KBY.tabix.bed.gz.tbi 256.8 KB 4a7aa1ccde8bc7ee522187784c5be118
genomic_resource.yaml 1.58 KB b2498cce94f078c695911b9b73bd5c3a
statistics/