Resource

Id Histone_ChIP-seq/ENCSR690CSDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR690CSD [biosample_summary="Homo sapiens prostate gland tissue male adult (37 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR690CSD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002367/
  • biosample_summary: Homo sapiens prostate gland tissue male adult (37 years)
  • date_created: 2019-07-29T21:03:01.185439+00:00
  • date_released: 2019-09-12
  • doi: 10.17989/ENCSR690CSD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR690CSD float

Histone_ChIP-seq_ENCSR690CSD
Histone_ChIP-seq ENCSR690CSD [biosample_summary="Homo sapiens prostate gland tissue male adult (37 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR690CSD [1.41, 6.02]
n
17,506,138
mean
3.05
sd
0.737

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 175061380.54% 16590
chr1 1985929 0.80% 1948
chr1_KI270712v1_random 538 0.31% 1
chr1_KI270713v1_random 1060 2.60% 2
chr2 1129323 0.47% 1082
chr3 660149 0.33% 678
chr4 745003 0.39% 599
chr5 924363 0.51% 862
chr6 896575 0.52% 799
chr7 803784 0.50% 731
chr8 728098 0.50% 733
chr9 691357 0.50% 634
chr10 1101460 0.82% 1018
chr11 788377 0.58% 803
chr12 956562 0.72% 886
chr13 491042 0.43% 425
chr14 585790 0.55% 566
chr15 436916 0.43% 423
chr16 702768 0.78% 714
chr17 971759 1.17% 931
chr17_GL000205v2_random 23493 12.66% 14
chr18 257115 0.32% 258
chr19 885890 1.51% 768
chr20 962527 1.49% 890
chr21 167263 0.36% 166
chr22 560501 1.10% 609
chr22_KI270732v1_random 856 2.06% 2
chr22_KI270733v1_random 5696 3.17% 9
chr22_KI270735v1_random 868 2.03% 1
chrUn_GL000219v1 4453 2.48% 3
chrUn_GL000224v1 626 0.35% 1
chrUn_KI270438v1 1524 1.35% 3
chrUn_KI270466v1 1066 86.46% 1
chrUn_KI270467v1 1743 44.46% 1
chrUn_KI270744v1 3330 1.98% 2
chrUn_KI270749v1 876 0.55% 1
chrX 27458 0.02% 26
3330 contigs with no values (184834215 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 16590 300 22281 1055.22 749
global segment-length histogram

Files

Filename Size md5
ENCFF293EYY.bed.gz 336.07 KB 6d429306c46864ffa69c9ba346fdbafb
ENCFF293EYY.tabix.bed.gz 172.82 KB 3bb11c842a945dc59af0ee7db29bc44f
ENCFF293EYY.tabix.bed.gz.tbi 80.45 KB a9b34c37c949625261675683360eeebe
genomic_resource.yaml 1.99 KB 91ad404f759b09fbaa98791ef794cb8e
statistics/