Resource

Id Histone_ChIP-seq/ENCSR690AFMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR690AFM [biosample_summary="Homo sapiens lower lobe of right lung tissue male adult (60 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR690AFM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002171/
  • biosample_summary: Homo sapiens lower lobe of right lung tissue male adult (60 years)
  • date_created: 2022-05-11T01:54:39.586290+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR690AFM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR690AFM float

Histone_ChIP-seq_ENCSR690AFM
Histone_ChIP-seq ENCSR690AFM [biosample_summary="Homo sapiens lower lobe of right lung tissue male adult (60 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR690AFM [1.63, 12.9]
n
31,588,073
mean
4.17
sd
1.46

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 315880730.98% 33754
chr1 2029817 0.82% 2334
chr2 2162629 0.89% 2675
chr3 1838473 0.93% 2237
chr4 1892797 1.00% 2215
chr5 2104429 1.16% 2339
chr6 1487853 0.87% 1912
chr7 1960835 1.23% 2231
chr8 1639266 1.13% 1842
chr9 1152424 0.83% 1241
chr10 1338126 1.00% 1457
chr11 1404212 1.04% 1584
chr12 1767179 1.33% 1734
chr13 785838 0.69% 1049
chr14 825900 0.77% 1032
chr15 834971 0.82% 890
chr16 946380 1.05% 955
chr17 573070 0.69% 618
chr18 609194 0.76% 762
chr19 4759876 8.12% 2794
chr20 502193 0.78% 624
chr21 436849 0.94% 505
chr22 352578 0.69% 441
chrX 166740 0.11% 255
chrY 16444 0.03% 28
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 33754 210 54515 935.83 663
global segment-length histogram

Files

Filename Size md5
ENCFF937TOI.bed.gz 694.13 KB 6a0cd92f1a3a5771d978b0a33b4c1015
ENCFF937TOI.tabix.bed.gz 347.04 KB e966e9eea5fa270237eb97c9959074d2
ENCFF937TOI.tabix.bed.gz.tbi 180.83 KB b21a7973fc5a7426289a4f33f42d506e
genomic_resource.yaml 1.54 KB d81662897462e5d4248f2c42fce34ce9
statistics/