Resource

Id Histone_ChIP-seq/ENCSR689SFJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR689SFJ [biosample_summary="Homo sapiens body of pancreas tissue male adult (37 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR689SFJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001150/
  • biosample_summary: Homo sapiens body of pancreas tissue male adult (37 years)
  • date_created: 2016-03-18T03:34:41.205782+00:00
  • date_released: 2016-11-04
  • doi: 10.17989/ENCSR689SFJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR689SFJ float

Histone_ChIP-seq_ENCSR689SFJ
Histone_ChIP-seq ENCSR689SFJ [biosample_summary="Homo sapiens body of pancreas tissue male adult (37 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR689SFJ [1.64, 8.02]
n
32,598,088
mean
3.43
sd
0.81

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 325980881.01% 79408
chr1 3453072 1.39% 8302
chr2 2365561 0.98% 6140
chr3 1961029 0.99% 4890
chr4 1140671 0.60% 3068
chr5 1672391 0.92% 4256
chr6 1424154 0.83% 3614
chr7 1460341 0.92% 3699
chr8 1010212 0.70% 2709
chr9 1384919 1.00% 3360
chr10 1393132 1.04% 3526
chr11 1804675 1.34% 4244
chr12 1997755 1.50% 4668
chr13 620881 0.54% 1647
chr14 1190045 1.11% 2937
chr15 1223141 1.20% 3036
chr16 1546593 1.71% 3522
chr17 2050028 2.46% 4627
chr18 498201 0.62% 1371
chr19 1962733 3.35% 4088
chr20 1007097 1.56% 2386
chr21 384866 0.82% 912
chr22 916818 1.80% 2029
chrX 125284 0.08% 363
chrY 4489 0.01% 14
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 79408 133 5648 410.51 308
global segment-length histogram

Files

Filename Size md5
ENCFF248LLX.bed.gz 1.51 MB f0560525e57745b482dbef42667b4a0a
ENCFF248LLX.tabix.bed.gz 785.69 KB 638e6ec1c73676e74d47c6981eac0317
ENCFF248LLX.tabix.bed.gz.tbi 144.88 KB 09f00510e02db0aa02906a9237efdf0f
genomic_resource.yaml 2.22 KB e697e190dff1406fd095693490c66d20
statistics/