Resource

Id Histone_ChIP-seq/ENCSR687ZCMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR687ZCM [biosample_summary="Homo sapiens muscle of leg tissue female embryo (110 days)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR687ZCM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001383/
  • biosample_summary: Homo sapiens muscle of leg tissue female embryo (110 days)
  • date_created: 2015-09-16T21:42:35.309290+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR687ZCM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (110 days)
  • status: released
  • submitter_comment: Processing cannot be completed on the GRCh38 assembly at this time due to a failure in peak calling.
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR687ZCM float

Histone_ChIP-seq_ENCSR687ZCM
Histone_ChIP-seq ENCSR687ZCM [biosample_summary="Homo sapiens muscle of leg tissue female embryo (110 days)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR687ZCM [1.73, 100]
n
74,409,817
mean
14.6
sd
12.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 744098172.31% 105350
chr1 7168564 2.88% 9661
chr2 5739438 2.37% 8273
chr3 4710601 2.38% 6738
chr4 3093453 1.63% 4492
chr5 3828528 2.11% 5455
chr6 4609151 2.70% 6343
chr7 3553440 2.23% 5192
chr8 3194140 2.20% 4833
chr9 3314547 2.39% 4683
chr10 4088619 3.06% 5640
chr11 4010220 2.97% 5484
chr12 3777591 2.83% 4959
chr13 1848285 1.62% 2660
chr14 2622550 2.45% 3445
chr15 2379004 2.33% 3477
chr16 2212503 2.45% 3425
chr17 3846134 4.62% 5141
chr18 1473481 1.83% 2163
chr19 2820465 4.81% 3884
chr20 1892665 2.94% 2845
chr21 880068 1.88% 1373
chr22 1529130 3.01% 2231
chrX 1817240 1.16% 2953
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 105350 155 16269 706.31 448
global segment-length histogram

Files

Filename Size md5
ENCFF563PBB.bed.gz 2.21 MB 1caa14748288d9821d883985c5de7d74
ENCFF563PBB.tabix.bed.gz 1.05 MB a75579ed0fd798652f07be1d006be1c5
ENCFF563PBB.tabix.bed.gz.tbi 301.35 KB e534c0cb97a6d71b1f34145b669d2d68
genomic_resource.yaml 1.62 KB c3462c185ff73987617d65e60dc78d6e
statistics/