Resource

Id Histone_ChIP-seq/ENCSR685XVIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR685XVI [biosample_summary="Homo sapiens skin epidermis tissue male adult (78 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR685XVI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001003/
  • biosample_summary: Homo sapiens skin epidermis tissue male adult (78 years)
  • date_created: 2020-07-02T16:56:00.678514+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR685XVI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (78 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR685XVI float

Histone_ChIP-seq_ENCSR685XVI
Histone_ChIP-seq ENCSR685XVI [biosample_summary="Homo sapiens skin epidermis tissue male adult (78 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR685XVI [1.73, 68.7]
n
88,220,033
mean
11.5
sd
10.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 882200332.74% 65770
chr1 9325992 3.75% 6609
chr2 6723674 2.78% 5208
chr3 5357564 2.70% 4093
chr4 2809714 1.48% 2319
chr5 3969211 2.19% 3155
chr6 4796559 2.81% 3716
chr7 3620349 2.27% 2888
chr8 3424878 2.36% 2802
chr9 4222115 3.05% 3024
chr10 4504700 3.37% 3383
chr11 4835636 3.58% 3520
chr12 4533633 3.40% 3213
chr13 1726334 1.51% 1470
chr14 3110658 2.91% 2175
chr15 3156812 3.10% 2389
chr16 3344236 3.70% 2553
chr17 5358931 6.44% 3641
chr18 1670094 2.08% 1377
chr19 4258152 7.26% 2790
chr20 2558391 3.97% 1850
chr21 1247684 2.67% 952
chr22 2334169 4.59% 1583
chrX 1290536 0.83% 1029
chrY 40011 0.07% 31
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 65770 235 43728 1341.34 927
global segment-length histogram

Files

Filename Size md5
ENCFF087WUV.bed.gz 1.52 MB 6c7644b051e695986f14b794b9df97c1
ENCFF087WUV.tabix.bed.gz 708.96 KB 2d2b8bafdfa29ba8ff3b5f1181051791
ENCFF087WUV.tabix.bed.gz.tbi 227.23 KB a832f73ea8cb9017e9ca37b71854aa9c
genomic_resource.yaml 1.72 KB 639de97547150c3396dd2b0cddc59b44
statistics/