Resource

Id Histone_ChIP-seq/ENCSR681RQPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR681RQP [biosample_summary="Homo sapiens placenta tissue female embryo" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR681RQP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue female embryo
  • date_created: 2022-05-11T01:54:16.303444+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR681RQP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR681RQP float

Histone_ChIP-seq_ENCSR681RQP
Histone_ChIP-seq ENCSR681RQP [biosample_summary="Homo sapiens placenta tissue female embryo" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR681RQP [1.68, 32.8]
n
66,090,286
mean
8.3
sd
4.49

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 660902862.05% 46868
chr1 6994216 2.81% 4826
chr2 5090273 2.10% 3558
chr3 4259665 2.15% 2991
chr4 2668276 1.40% 1926
chr5 3439741 1.89% 2434
chr6 4047851 2.37% 2859
chr7 3674687 2.31% 2577
chr8 2768385 1.91% 1970
chr9 3049367 2.20% 2078
chr10 2903245 2.17% 2015
chr11 3607248 2.67% 2461
chr12 3168149 2.38% 2343
chr13 1442995 1.26% 1069
chr14 2467629 2.31% 1649
chr15 2035256 2.00% 1478
chr16 2066171 2.29% 1559
chr17 2855449 3.43% 1964
chr18 1154461 1.44% 868
chr19 2766535 4.72% 2008
chr20 1835699 2.85% 1243
chr21 750629 1.61% 592
chr22 1448188 2.85% 981
chrX 1596171 1.02% 1419
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 46868 210 21526 1410.14 904
global segment-length histogram

Files

Filename Size md5
ENCFF452ROO.bed.gz 1.09 MB b190b591872f2bfbb3042fe71ab597ae
ENCFF452ROO.tabix.bed.gz 506.68 KB ab1b89bd59b9607bbacdb525572c01e3
ENCFF452ROO.tabix.bed.gz.tbi 167.57 KB 7f2bba5c848f03b45547eefa9858b049
genomic_resource.yaml 1.45 KB 70fa6fa284505f5e5eadde0948ee6d8a
statistics/