Resource

Id Histone_ChIP-seq/ENCSR681AIWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR681AIW [biosample_summary="Homo sapiens iPS DF 6.9" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR681AIW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007098/
  • biosample_summary: Homo sapiens iPS DF 6.9
  • date_created: 2015-09-16T19:16:59.121141+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR681AIW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR681AIW float

Histone_ChIP-seq_ENCSR681AIW
Histone_ChIP-seq ENCSR681AIW [biosample_summary="Homo sapiens iPS DF 6.9" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR681AIW [1.57, 9.16]
n
7,146,875
mean
3.65
sd
0.776

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 71468750.22% 28763
chr1 585075 0.24% 2298
chr2 300988 0.12% 1226
chr3 219352 0.11% 1050
chr4 141663 0.07% 694
chr5 103494 0.06% 485
chr6 97119 0.06% 452
chr7 955894 0.60% 3734
chr8 337156 0.23% 1356
chr9 151819 0.11% 692
chr10 540689 0.40% 2040
chr11 127303 0.09% 582
chr12 758359 0.57% 2878
chr13 160515 0.14% 680
chr14 245392 0.23% 979
chr15 125490 0.12% 540
chr16 198709 0.22% 865
chr17 91883 0.11% 423
chr18 78507 0.10% 379
chr19 707054 1.21% 2787
chr20 164120 0.25% 670
chr21 285534 0.61% 1286
chr22 737225 1.45% 2493
chrX 21728 0.01% 119
chrY 11807 0.02% 55
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 28763 118 2583 248.47 205
global segment-length histogram

Files

Filename Size md5
ENCFF855NNR.bed.gz 494.96 KB cf06da428bb46e4c256644a7772e4ac4
ENCFF855NNR.tabix.bed.gz 268.99 KB 4868e179759afc319806c9c029091d86
ENCFF855NNR.tabix.bed.gz.tbi 82.95 KB a5a8b07ca5d51b5426fd0afb48cf93a2
genomic_resource.yaml 2.11 KB 40ccb42ef957ace48d667fa5ba5ad9e2
statistics/