Resource

Id Histone_ChIP-seq/ENCSR678RFScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR678RFS [biosample_summary="Homo sapiens heart left ventricle tissue male adult (69 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR678RFS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (69 years)
  • date_created: 2022-02-02T13:42:43.447520+00:00
  • date_released: 2022-07-21
  • doi: 10.17989/ENCSR678RFS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (69 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR678RFS float

Histone_ChIP-seq_ENCSR678RFS
Histone_ChIP-seq ENCSR678RFS [biosample_summary="Homo sapiens heart left ventricle tissue male adult (69 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR678RFS [1.63, 15.2]
n
183,540,508
mean
4.83
sd
1.78

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1835405085.70% 165041
chr1 18446889 7.41% 16151
chr2 15121196 6.24% 13534
chr3 13431810 6.77% 11878
chr4 7892114 4.15% 7783
chr5 10632026 5.86% 9796
chr6 10503547 6.15% 10060
chr7 8653466 5.43% 8370
chr8 8124114 5.60% 7627
chr9 7826267 5.66% 6868
chr10 10253577 7.66% 8918
chr11 9643526 7.14% 8337
chr12 9040968 6.78% 8024
chr13 4741190 4.15% 4485
chr14 5934264 5.54% 5159
chr15 6946856 6.81% 6021
chr16 5671307 6.28% 5009
chr17 8464681 10.17% 6948
chr18 3967962 4.94% 3789
chr19 5266995 8.99% 4620
chr20 4895138 7.60% 4153
chr21 1759916 3.77% 1694
chr22 4213403 8.29% 3362
chrX 2053290 1.32% 2375
chrY 56006 0.10% 80
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 165041 200 42519 1112.09 751
global segment-length histogram

Files

Filename Size md5
ENCFF605IFK.bed.gz 3.59 MB 4dd131a505f8a87dbf8c71171d529cfa
ENCFF605IFK.tabix.bed.gz 1.68 MB c0767e3bc17d5b249477692a54b97f4a
ENCFF605IFK.tabix.bed.gz.tbi 337.82 KB 863587114f085af6f587d79df7acde19
genomic_resource.yaml 1.53 KB c1ca91c24f56b3c66af739a3957a547b
statistics/