Resource

Id Histone_ChIP-seq/ENCSR678IYCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR678IYC [biosample_summary="Homo sapiens heart right ventricle tissue male adult (54 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR678IYC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (54 years)
  • date_created: 2022-02-02T13:42:41.328666+00:00
  • date_released: 2022-07-21
  • doi: 10.17989/ENCSR678IYC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR678IYC float

Histone_ChIP-seq_ENCSR678IYC
Histone_ChIP-seq ENCSR678IYC [biosample_summary="Homo sapiens heart right ventricle tissue male adult (54 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR678IYC [1.55, 14.4]
n
101,759,880
mean
4.52
sd
1.56

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1017598803.16% 94731
chr1 7209823 2.90% 6868
chr2 8340959 3.44% 8110
chr3 7077440 3.57% 6896
chr4 7363815 3.87% 7402
chr5 7423997 4.09% 6915
chr6 6225103 3.64% 6174
chr7 6061978 3.80% 5679
chr8 5691009 3.92% 5268
chr9 4032037 2.91% 3833
chr10 4624343 3.46% 4346
chr11 4750899 3.52% 4362
chr12 5289818 3.97% 4730
chr13 3333706 2.91% 3411
chr14 3213284 3.00% 3100
chr15 2634886 2.58% 2398
chr16 2696173 2.98% 2389
chr17 1778048 2.14% 1630
chr18 2485328 3.09% 2476
chr19 5996248 10.23% 2841
chr20 1848444 2.87% 1820
chr21 1332436 2.85% 1332
chr22 1042203 2.05% 994
chrX 1218369 0.78% 1627
chrY 89534 0.16% 130
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 94731 215 72228 1074.2 782
global segment-length histogram

Files

Filename Size md5
ENCFF252ORJ.bed.gz 1.96 MB 8f4b86bf0c7e9ac12ba928e01a46cc38
ENCFF252ORJ.tabix.bed.gz 973.95 KB 51de449d841ad87d82f1024e287c083f
ENCFF252ORJ.tabix.bed.gz.tbi 382.0 KB 83859f0a7b7f488cd88b1bc498971474
genomic_resource.yaml 1.53 KB 53628affd94d55f33f8ba8a62e853502
statistics/