Resource

Id Histone_ChIP-seq/ENCSR676LPFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR676LPF [biosample_summary="Homo sapiens heart right ventricle tissue male child (3 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR676LPF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male child (3 years)
  • date_created: 2015-10-01T07:16:18.815044+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR676LPF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR676LPF float

Histone_ChIP-seq_ENCSR676LPF
Histone_ChIP-seq ENCSR676LPF [biosample_summary="Homo sapiens heart right ventricle tissue male child (3 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR676LPF [1.74, 8.49]
n
4,225,258
mean
4.08
sd
0.817

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 42252580.13% 11877
chr1 334892 0.13% 968
chr2 322742 0.13% 927
chr3 184198 0.09% 565
chr4 202330 0.11% 576
chr5 266942 0.15% 781
chr6 273222 0.16% 804
chr7 225649 0.14% 621
chr8 213003 0.15% 620
chr9 160089 0.12% 470
chr10 259421 0.19% 683
chr11 179579 0.13% 519
chr12 237915 0.18% 631
chr13 142317 0.12% 384
chr14 176436 0.16% 478
chr15 110690 0.11% 317
chr16 161222 0.18% 439
chr17 174260 0.21% 478
chr17_GL000205v2_random 16308 8.79% 24
chr18 116727 0.15% 319
chr19 115885 0.20% 326
chr20 198327 0.31% 529
chr21 50381 0.11% 143
chr22 71804 0.14% 204
chr22_KI270733v1_random 187 0.10% 1
chrUn_GL000219v1 5006 2.79% 8
chrX 25218 0.02% 61
chrY 508 <0.01% 1
3339 contigs with no values (128532524 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 11877 175 3355 355.75 304
global segment-length histogram

Files

Filename Size md5
ENCFF550VSQ.bed.gz 231.22 KB d85703c1315bc420471d7959ce38e0ee
ENCFF550VSQ.tabix.bed.gz 118.62 KB 46e4149ae6da3c586c8d4f37e4331e80
ENCFF550VSQ.tabix.bed.gz.tbi 79.18 KB 8c63427961b5fb2166462c47565ab085
genomic_resource.yaml 2.01 KB c32fa5e1566f6692f21043b1ffbadf67
statistics/