Resource

Id Histone_ChIP-seq/ENCSR676FAMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR676FAM [biosample_summary="Homo sapiens spleen tissue female adult (41 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR676FAM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (41 years)
  • date_created: 2020-05-01T02:59:09.503360+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR676FAM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR676FAM float

Histone_ChIP-seq_ENCSR676FAM
Histone_ChIP-seq ENCSR676FAM [biosample_summary="Homo sapiens spleen tissue female adult (41 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR676FAM [1.42, 14.5]
n
52,009,489
mean
4.6
sd
1.87

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 520094891.62% 40634
chr1 3241459 1.30% 2609
chr2 3758312 1.55% 3315
chr3 2991330 1.51% 2656
chr4 3126608 1.64% 2728
chr5 3362306 1.85% 2852
chr6 2607951 1.53% 2302
chr7 3282836 2.06% 2559
chr8 2714298 1.87% 2155
chr9 1789080 1.29% 1434
chr10 2048457 1.53% 1651
chr11 2352098 1.74% 1915
chr12 2680874 2.01% 1881
chr13 1515185 1.32% 1518
chr14 1485716 1.39% 1323
chr15 1320348 1.29% 1038
chr16 1439796 1.59% 1046
chr17 895103 1.08% 660
chr18 1064883 1.32% 948
chr19 6275628 10.71% 2306
chr20 747253 1.16% 646
chr21 791364 1.69% 768
chr22 570054 1.12% 491
chrX 1948550 1.25% 1833
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40634 223 66257 1279.95 896
global segment-length histogram

Files

Filename Size md5
ENCFF111YXW.bed.gz 861.92 KB 0f05bd4cd7fcd0cad9ce8f9a31362dfb
ENCFF111YXW.tabix.bed.gz 426.91 KB c14bfd88c33b9684b492e88acb4ff3de
ENCFF111YXW.tabix.bed.gz.tbi 214.61 KB 1fbd4b2da07ef1542b9d48b032c4c601
genomic_resource.yaml 1.71 KB 59176db85a5d3ee5241ac70a53e81ab9
statistics/