Resource

Id Histone_ChIP-seq/ENCSR675VCHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR675VCH [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR675VCH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (89 years)
  • date_created: 2021-01-28T04:10:52.344609+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR675VCH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (89 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR675VCH float

Histone_ChIP-seq_ENCSR675VCH
Histone_ChIP-seq ENCSR675VCH [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR675VCH [1.74, 10.7]
n
22,119,988
mean
4.44
sd
1.49

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 221199880.69% 34434
chr1 994144 0.40% 1331
chr2 1128044 0.47% 1358
chr3 458628 0.23% 641
chr4 669691 0.35% 784
chr5 897899 0.49% 1107
chr6 1136260 0.67% 1323
chr7 890250 0.56% 943
chr8 731021 0.50% 1030
chr9 475836 0.34% 568
chr10 967255 0.72% 1290
chr11 734049 0.54% 1096
chr12 807167 0.61% 997
chr13 329624 0.29% 408
chr14 553593 0.52% 670
chr15 473638 0.46% 644
chr16 428259 0.47% 586
chr17 885300 1.06% 1038
chr18 261856 0.33% 336
chr19 395551 0.67% 543
chr20 430727 0.67% 620
chr21 134316 0.29% 208
chr22 142815 0.28% 208
chrX 8194065 5.25% 16705
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 34434 170 21244 642.39 444
global segment-length histogram

Files

Filename Size md5
ENCFF042NGO.bed.gz 605.83 KB c0e257c78723e8bbdbbed81de2ad11b7
ENCFF042NGO.tabix.bed.gz 323.59 KB 31532fb175426decf92eff4fd4c85e25
ENCFF042NGO.tabix.bed.gz.tbi 108.68 KB 0c107f4cdf53b667088f9e8819a78853
genomic_resource.yaml 2.06 KB ea09c8d873b44cda47095a7f54540c93
statistics/