Resource

Id Histone_ChIP-seq/ENCSR675FLJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR675FLJ [biosample_summary="Homo sapiens H1" and target="H4K5ac"]
Description
Labels
  • accession: ENCSR675FLJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-10-01T07:16:17.222649+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR675FLJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H4K5ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR675FLJ float

Histone_ChIP-seq_ENCSR675FLJ
Histone_ChIP-seq ENCSR675FLJ [biosample_summary="Homo sapiens H1" and target="H4K5ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR675FLJ [1.8, 27.7]
n
13,114,726
mean
5.67
sd
2.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 131147260.41% 51479
chr1 1249839 0.50% 4780
chr2 1008113 0.42% 3917
chr3 809188 0.41% 3237
chr4 672345 0.35% 2645
chr5 728975 0.40% 2833
chr6 829415 0.49% 3232
chr7 730867 0.46% 2895
chr8 536107 0.37% 2118
chr9 522935 0.38% 2057
chr10 582273 0.44% 2281
chr11 653452 0.48% 2542
chr12 691103 0.52% 2642
chr13 340222 0.30% 1401
chr14 379569 0.35% 1485
chr15 356325 0.35% 1413
chr16 437115 0.48% 1714
chr17 613428 0.74% 2382
chr18 248825 0.31% 1002
chr19 652044 1.11% 2577
chr20 331746 0.51% 1296
chr21 122424 0.26% 497
chr22 262805 0.52% 1016
chrX 339879 0.22% 1450
chrY 15732 0.03% 67
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51479 110 2980 254.76 204
global segment-length histogram

Files

Filename Size md5
ENCFF097DDN.bed.gz 1.1 MB 246bb06a7eabf4f86d3dc8a954bdc858
ENCFF097DDN.tabix.bed.gz 523.54 KB 245ed07b17b55933fdba5606a80be1bb
ENCFF097DDN.tabix.bed.gz.tbi 196.63 KB c39558647f437bdf933d9f9d739a024b
genomic_resource.yaml 2.08 KB e2a101e344dda135ceaaa906d5b99317
statistics/