Resource

Id Histone_ChIP-seq/ENCSR674WSLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR674WSL [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR674WSL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)
  • date_created: 2017-12-06T21:05:08.070858+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR674WSL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR674WSL float

Histone_ChIP-seq_ENCSR674WSL
Histone_ChIP-seq ENCSR674WSL [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR674WSL [1.24, 23.8]
n
210,499,785
mean
6.51
sd
2.94

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2104997856.54% 129568
chr1 20563236 8.26% 12121
chr1_KI270712v1_random 4885 2.77% 5
chr1_KI270713v1_random 745 1.83% 1
chr2 17493715 7.22% 10694
chr3 15353945 7.74% 9155
chr4 9687182 5.09% 6407
chr5 10907621 6.01% 7007
chr6 11441201 6.70% 7710
chr7 10595401 6.65% 6795
chr8 8937062 6.16% 5810
chr9 9841696 7.11% 5834
chr9_KI270717v1_random 397 0.99% 1
chr10 11927935 8.91% 6951
chr11 10704438 7.92% 6332
chr12 10605575 7.96% 6433
chr13 5074458 4.44% 3161
chr14 7101784 6.63% 4176
chr14_GL000194v1_random 428 0.22% 1
chr15 7439398 7.29% 4381
chr16 6649106 7.36% 4033
chr17 9667580 11.61% 5534
chr17_GL000205v2_random 1464 0.79% 1
chr18 4094513 5.09% 2748
chr19 6445429 11.00% 3872
chr20 5666587 8.79% 3348
chr21 2161435 4.63% 1400
chr22 4384836 8.63% 2422
chrM 6248 37.71% 6
chrUn_GL000195v1 494 0.27% 1
chrUn_GL000219v1 385 0.21% 1
chrX 3642705 2.33% 3128
chrY 97901 0.17% 99
3334 contigs with no values (128064512 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 129568 250 94613 1624.63 1139
global segment-length histogram

Files

Filename Size md5
ENCFF972XSP.bed.gz 3.03 MB 09f2250f2fcd53d441737d361efc392a
ENCFF972XSP.tabix.bed.gz 1.36 MB bfa6d279c3a41258d8e6887b91f3b9f1
ENCFF972XSP.tabix.bed.gz.tbi 332.53 KB e370d84e0ff599521318c10701183829
genomic_resource.yaml 1.55 KB c2dd463abf2ee441298e2903c24d8f56
statistics/