Resource

Id Histone_ChIP-seq/ENCSR673XMIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR673XMI [biosample_summary="Homo sapiens chorionic villus tissue male embryo (16 weeks)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR673XMI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0007106/
  • biosample_summary: Homo sapiens chorionic villus tissue male embryo (16 weeks)
  • date_created: 2017-03-22T16:16:47.132933+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR673XMI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR673XMI float

Histone_ChIP-seq_ENCSR673XMI
Histone_ChIP-seq ENCSR673XMI [biosample_summary="Homo sapiens chorionic villus tissue male embryo (16 weeks)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR673XMI [1.56, 44.2]
n
34,898,496
mean
4.67
sd
1.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 348984961.08% 59729
chr1 3493451 1.40% 6049
chr1_KI270709v1_random 680 1.02% 1
chr1_KI270712v1_random 541 0.31% 1
chr1_KI270713v1_random 760 1.87% 2
chr2 2279387 0.94% 4052
chr3 1024711 0.52% 2042
chr4 1491790 0.78% 2232
chr5 1635517 0.90% 2845
chr6 1381114 0.81% 2523
chr7 1806099 1.13% 3015
chr8 1316516 0.91% 2342
chr9 1790651 1.29% 2824
chr9_KI270719v1_random 929 0.53% 2
chr10 1979328 1.48% 3445
chr11 2186808 1.62% 3751
chr12 1570818 1.18% 2663
chr13 737295 0.64% 1253
chr14 946122 0.88% 1635
chr15 793020 0.78% 1526
chr16 1671822 1.85% 2664
chr16_KI270728v1_random 200 0.01% 1
chr17 2135718 2.57% 3560
chr17_GL000205v2_random 11123 5.99% 16
chr17_KI270729v1_random 1671 0.60% 2
chr18 627062 0.78% 1152
chr19 2143530 3.66% 3513
chr20 1774485 2.75% 2883
chr21 540740 1.16% 960
chr22 1332922 2.62% 2249
chr22_KI270732v1_random 2111 5.08% 1
chr22_KI270733v1_random 394 0.22% 1
chr22_KI270735v1_random 899 2.10% 2
chr22_KI270738v1_random 1356 1.36% 2
chrUn_GL000219v1 1214 0.68% 3
chrUn_KI270438v1 1128 1.00% 3
chrUn_KI270744v1 563 0.33% 1
chrUn_KI270749v1 1226 0.77% 3
chrX 212638 0.14% 503
chrY 2157 <0.01% 7
3327 contigs with no values (125294968 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 59729 160 9290 584.28 452
global segment-length histogram

Files

Filename Size md5
ENCFF918WXX.bed.gz 1.18 MB ec2ff163acdb484f87c2d8d6936e52d3
ENCFF918WXX.tabix.bed.gz 598.12 KB bd71419f132d7930e149ca4e6a548c16
ENCFF918WXX.tabix.bed.gz.tbi 157.05 KB 7ad17375d759ad68db7a0e7a990f91a3
genomic_resource.yaml 2.01 KB 334f2ce95705d038b146a6dbae739722
statistics/