Resource

Id Histone_ChIP-seq/ENCSR671WZXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR671WZX [biosample_summary="Homo sapiens neurosphere embryo (15 weeks) originated from ganglionic eminence" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR671WZX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_NTR_0000427/
  • biosample_summary: Homo sapiens neurosphere embryo (15 weeks) originated from ganglionic eminence
  • date_created: 2015-09-15T20:27:15.486276+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR671WZX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (15 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR671WZX float

Histone_ChIP-seq_ENCSR671WZX
Histone_ChIP-seq ENCSR671WZX [biosample_summary="Homo sapiens neurosphere embryo (15 weeks) originated from ganglionic eminence" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR671WZX [1.64, 24.3]
n
43,765,172
mean
5.56
sd
2.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 437651721.36% 46232
chr1 3891003 1.56% 4116
chr2 2800170 1.16% 2973
chr3 2248157 1.13% 2567
chr4 1954772 1.03% 1848
chr5 2353793 1.30% 2364
chr6 2864618 1.68% 2808
chr7 2123640 1.33% 2092
chr8 1561090 1.08% 1663
chr9 1758434 1.27% 1819
chr10 2548267 1.90% 2506
chr11 2917493 2.16% 3097
chr12 1960721 1.47% 1953
chr13 804317 0.70% 866
chr14 1659801 1.55% 1704
chr15 1429695 1.40% 1689
chr16 1227126 1.36% 1210
chr17 2318961 2.79% 2241
chr18 930432 1.16% 1029
chr19 1103222 1.88% 1091
chr20 2031998 3.15% 2220
chr21 336283 0.72% 361
chr22 899037 1.77% 1057
chrX 2042142 1.31% 2958
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 46232 210 51164 946.64 632
global segment-length histogram

Files

Filename Size md5
ENCFF373VUB.bed.gz 1.01 MB 2c3be5253565c68a6dab284bd4d0c70c
ENCFF373VUB.tabix.bed.gz 478.58 KB 9c126e267bad073fc843cb6c4b6b772d
ENCFF373VUB.tabix.bed.gz.tbi 136.81 KB c81ad710560b899ca752f83528d09e4e
genomic_resource.yaml 2.08 KB 5879236852f63d3b9c2bb1e868d3f37a
statistics/