Resource

Id Histone_ChIP-seq/ENCSR667SCYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR667SCY [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (37 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR667SCY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue male adult (37 years)
  • date_created: 2019-07-29T21:30:10.749801+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR667SCY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR667SCY float

Histone_ChIP-seq_ENCSR667SCY
Histone_ChIP-seq ENCSR667SCY [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (37 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR667SCY [1.49, 11.5]
n
16,038,204
mean
4.31
sd
1.46

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 160382040.50% 18091
chr1 820479 0.33% 1015
chr2 759883 0.31% 1076
chr3 687757 0.35% 931
chr4 900042 0.47% 1060
chr5 1051922 0.58% 1273
chr6 555136 0.33% 798
chr7 1141931 0.72% 1341
chr8 667902 0.46% 890
chr9 491293 0.35% 584
chr10 696719 0.52% 861
chr11 629806 0.47% 811
chr12 895632 0.67% 947
chr13 288818 0.25% 430
chr14 385393 0.36% 540
chr15 386444 0.38% 459
chr16 554547 0.61% 613
chr17 276452 0.33% 358
chr18 227500 0.28% 313
chr19 3757673 6.41% 2730
chr20 168112 0.26% 224
chr21 452436 0.97% 504
chr22 101963 0.20% 134
chrX 56160 0.04% 82
chrY 84204 0.15% 117
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18091 205 26214 886.53 636
global segment-length histogram

Files

Filename Size md5
ENCFF948KKV.bed.gz 376.63 KB cd1414beeda6bba0c778d3c099cf3b9f
ENCFF948KKV.tabix.bed.gz 187.13 KB 5f3fba377653b208e27e89d0ca279d0d
ENCFF948KKV.tabix.bed.gz.tbi 100.24 KB 4ce538a0b5de5c3f59ba0388b5d8844f
genomic_resource.yaml 1.51 KB bfa1876ae1f90d584196c2e8ded04a53
statistics/