Resource

Id Histone_ChIP-seq/ENCSR662ASZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR662ASZ [biosample_summary="Homo sapiens tibial nerve tissue male adult (54 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR662ASZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001323/
  • biosample_summary: Homo sapiens tibial nerve tissue male adult (54 years)
  • date_created: 2017-12-06T21:05:22.373840+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR662ASZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR662ASZ float

Histone_ChIP-seq_ENCSR662ASZ
Histone_ChIP-seq ENCSR662ASZ [biosample_summary="Homo sapiens tibial nerve tissue male adult (54 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR662ASZ [1.67, 9.69]
n
1,939,421
mean
3.85
sd
0.802

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 19394210.06% 7758
chr1 168167 0.07% 703
chr1_KI270712v1_random 1001 0.57% 4
chr1_KI270714v1_random 194 0.47% 2
chr2 185115 0.08% 680
chr3 73232 0.04% 336
chr4 82535 0.04% 357
chr5 93954 0.05% 413
chr6 118630 0.07% 502
chr7 120880 0.08% 463
chr8 78449 0.05% 327
chr9 99192 0.07% 368
chr10 113876 0.09% 425
chr11 79865 0.06% 356
chr12 81207 0.06% 355
chr13 56840 0.05% 221
chr14 52030 0.05% 220
chr15 62773 0.06% 231
chr16 63514 0.07% 273
chr17 128716 0.15% 429
chr17_GL000205v2_random 114 0.06% 1
chr18 28199 0.04% 134
chr19 127953 0.22% 450
chr20 60624 0.09% 257
chr21 19822 0.04% 82
chr22 31914 0.06% 124
chr22_KI270733v1_random 3699 2.06% 14
chrUn_GL000195v1 585 0.32% 3
chrUn_KI270337v1 107 9.55% 1
chrUn_KI270438v1 1086 0.97% 5
chrUn_KI270466v1 470 38.12% 2
chrUn_KI270467v1 1437 36.66% 1
chrUn_KI270519v1 98 0.07% 1
chrUn_KI270746v1 202 0.30% 1
chrX 2941 <0.01% 17
3332 contigs with no values (185215090 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 7758 90 2850 249.99 187
global segment-length histogram

Files

Filename Size md5
ENCFF105KRK.bed.gz 140.3 KB 71094995ba6b553bd3e1f5ddffbcaaa2
ENCFF105KRK.tabix.bed.gz 74.91 KB 95bd122d56021b36ef88949bd49c4a4b
ENCFF105KRK.tabix.bed.gz.tbi 52.37 KB e8feee9ab3875cc8e0076a70a30aa713
genomic_resource.yaml 1.98 KB 288d36f221d1be19c5252ce96066b7af
statistics/