Histone_ChIP-seq_ENCSR661BMA
Histone_ChIP-seq ENCSR661BMA [biosample_summary="Homo sapiens SK-N-SH" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR661BMA |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR661BMA [biosamplesummary="Homo sapiens SK-N-SH" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN691JDA|/analyses/ENCAN691JDA/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF164MOZ|/files/ENCFF164MOZ/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 33300036 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed alignments file {ENCFF017HHL|/files/ENCFF017HHL/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 43608527 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR661BMA | float |
Histone_ChIP-seq_ENCSR661BMA |
Histone_ChIP-seq ENCSR661BMA [biosample_summary="Homo sapiens SK-N-SH" and target="H3K4me1"]
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[1.46, 8.45] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF864MVD.bed.gz | 1.79 MB | 285c53ebd2250a8bf8483598181787ea |
| ENCFF864MVD.bed.gz.dvc | 101.0 B | 0511464831259c8bf8a03b446dd2ce84 |
| ENCFF864MVD.tabix.bed.gz | 834.97 KB | a8b1be8c0ee9af0979933f764ff1309b |
| ENCFF864MVD.tabix.bed.gz.dvc | 106.0 B | 9adb8d353eb77a44495958f3db6c566a |
| ENCFF864MVD.tabix.bed.gz.tbi | 264.89 KB | d511097f0dcab0d07e405a1869aa5c1e |
| ENCFF864MVD.tabix.bed.gz.tbi.dvc | 110.0 B | 1968c57d808315e9ac52bed9139382f2 |
| genomic_resource.yaml | 2.38 KB | 18e52f58f4a59b0e0192be8405db8b6d |
| genomic_resource_original.yaml | 2.28 KB | a82a893a2a883729d24ded115bb94d83 |
| statistics/ |