Resource
| Id | Histone_ChIP-seq/ENCSR660WMS |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR660WMS [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"] |
| Description |
status: released biological_replicates: Rep 1 summary: 48 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR660WMS | float |
Histone_ChIP-seq_ENCSR660WMS |
Histone_ChIP-seq ENCSR660WMS [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"]
|
 |
[1.24, 32] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 142192082 | 4.42% | 167505 |
| chr1 | 13395496 | 5.38% | 16436 |
| chr1_KI270706v1_random | 307 | 0.18% | 1 |
| chr1_KI270711v1_random | 300 | 0.71% | 1 |
| chr1_KI270712v1_random | 1400 | 0.80% | 4 |
| chr1_KI270714v1_random | 250 | 0.60% | 1 |
| chr2 | 9204046 | 3.80% | 11482 |
| chr3 | 6601021 | 3.33% | 8464 |
| chr3_GL000221v1_random | 308 | 0.20% | 1 |
| chr4 | 4186489 | 2.20% | 5352 |
| chr5 | 5951250 | 3.28% | 7444 |
| chr6 | 4874310 | 2.85% | 6443 |
| chr7 | 7444639 | 4.67% | 8786 |
| chr8 | 6850807 | 4.72% | 7807 |
| chr9 | 6476310 | 4.68% | 7761 |
| chr9_KI270719v1_random | 291 | 0.16% | 1 |
| chr10 | 6754922 | 5.05% | 8150 |
| chr11 | 7548603 | 5.59% | 8872 |
| chr12 | 6569744 | 4.93% | 7855 |
| chr13 | 2309570 | 2.02% | 2910 |
| chr14 | 4185318 | 3.91% | 5073 |
| chr14_GL000194v1_random | 5895 | 3.08% | 13 |
| chr14_GL000225v1_random | 533 | 0.25% | 2 |
| chr14_KI270723v1_random | 250 | 0.66% | 1 |
| chr15 | 4620568 | 4.53% | 5996 |
| chr16 | 8568518 | 9.48% | 8324 |
| chr16_KI270728v1_random | 285 | 0.02% | 1 |
| chr17 | 9804567 | 11.78% | 10879 |
| chr17_GL000205v2_random | 282 | 0.15% | 1 |
| chr18 | 1785690 | 2.22% | 2586 |
| chr19 | 8770610 | 14.96% | 7068 |
| chr20 | 5122597 | 7.95% | 5717 |
| chr21 | 1867583 | 4.00% | 2116 |
| chr22 | 5735911 | 11.29% | 6126 |
| chr22_KI270731v1_random | 901 | 0.60% | 3 |
| chr22_KI270733v1_random | 717 | 0.40% | 2 |
| chr22_KI270735v1_random | 293 | 0.68% | 1 |
| chrUn_GL000195v1 | 719 | 0.39% | 2 |
| chrUn_GL000216v2 | 989 | 0.56% | 3 |
| chrUn_GL000219v1 | 2416 | 1.35% | 4 |
| chrUn_GL000224v1 | 965 | 0.54% | 3 |
| chrUn_KI270438v1 | 3417 | 3.04% | 5 |
| chrUn_KI270442v1 | 283 | 0.07% | 1 |
| chrUn_KI270743v1 | 417 | 0.20% | 1 |
| chrUn_KI270744v1 | 1942 | 1.15% | 5 |
| chrUn_KI270745v1 | 257 | 0.61% | 1 |
| chrX | 3538508 | 2.27% | 5796 |
| chrY | 1588 | <0.01% | 4 |
| 3319 contigs with no values (123793392 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 167505 | 250 | 118659 | 848.88 | 429 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF605NVW.bed.gz | 3.08 MB | 2f426753f3cc76a94ba39e0002bbba78 |
| ENCFF605NVW.tabix.bed.gz | 1.55 MB | 57e3fece1c9115af6b3ce5e50c88847c |
| ENCFF605NVW.tabix.bed.gz.tbi | 240.59 KB | 7cf592575f6bce29834ab3594679a872 |
| genomic_resource.yaml | 3.12 KB | 4b1008b68446371740179ce28c635a22 |
| statistics/ |