Resource

Id Histone_ChIP-seq/ENCSR660TLDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR660TLD [biosample_summary="Homo sapiens BLaER1 120 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR660TLD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 120 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:11.837445+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR660TLD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 120 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR660TLD float

Histone_ChIP-seq_ENCSR660TLD
Histone_ChIP-seq ENCSR660TLD [biosample_summary="Homo sapiens BLaER1 120 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR660TLD [1.19, 28.9]
n
105,717,498
mean
6.33
sd
4.88

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1057174983.29% 101793
chr1 4662980 1.87% 3975
chr1_KI270709v1_random 426 0.64% 1
chr1_KI270712v1_random 20237 11.50% 26
chr1_KI270713v1_random 9441 23.17% 8
chr1_KI270714v1_random 5992 14.36% 11
chr2 3787278 1.56% 3222
chr3 1834802 0.93% 1764
chr4 1548724 0.81% 1476
chr5 2247417 1.24% 1908
chr6 2116166 1.24% 1805
chr7 2183294 1.37% 1828
chr8 2251823 1.55% 2060
chr9 2260560 1.63% 2086
chr9_KI270719v1_random 297 0.17% 1
chr10 2232079 1.67% 1943
chr11 2341894 1.73% 1994
chr12 2140511 1.61% 1715
chr13 986814 0.86% 859
chr14 1214865 1.13% 1090
chr15 1815601 1.78% 1513
chr15_KI270727v1_random 1917 0.43% 5
chr16 1895179 2.10% 1585
chr17 2660323 3.20% 2095
chr17_KI270729v1_random 505 0.18% 2
chr18 794682 0.99% 800
chr19 1615607 2.76% 1332
chr20 1384381 2.15% 1225
chr21 674408 1.44% 622
chr22 1203980 2.37% 1093
chr22_KI270733v1_random 2311 1.29% 2
chrUn_GL000220v1 785 0.49% 2
chrUn_KI270438v1 3217 2.86% 5
chrUn_KI270744v1 1030 0.61% 3
chrX 61816360 39.62% 63733
chrY 1612 <0.01% 4
3331 contigs with no values (127223237 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 101793 250 55655 1038.55 550
global segment-length histogram

Files

Filename Size md5
ENCFF647XIW.bed.gz 1.93 MB c9b44f61d31feb9a9372495ebf31335b
ENCFF647XIW.tabix.bed.gz 979.44 KB 197fe609a250cf4f9aee55647785c919
ENCFF647XIW.tabix.bed.gz.tbi 133.62 KB 875d338eac8d08f4eea39ae19999e9b5
genomic_resource.yaml 3.13 KB 634677c382e260236db88be5652359cb
statistics/