Resource

Id Histone_ChIP-seq/ENCSR659RHVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR659RHV [biosample_summary="Homo sapiens large intestine tissue male embryo (108 days)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR659RHV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000059/
  • biosample_summary: Homo sapiens large intestine tissue male embryo (108 days)
  • date_created: 2015-09-16T21:42:18.103889+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR659RHV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (108 days)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR659RHV float

Histone_ChIP-seq_ENCSR659RHV
Histone_ChIP-seq ENCSR659RHV [biosample_summary="Homo sapiens large intestine tissue male embryo (108 days)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR659RHV [1.68, 91.7]
n
81,907,473
mean
15.2
sd
10.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 819074732.55% 73862
chr1 8109462 3.26% 7098
chr1_KI270713v1_random 996 2.44% 3
chr1_KI270714v1_random 311 0.75% 1
chr2 6203583 2.56% 5725
chr3 5124182 2.58% 4605
chr4 4053616 2.13% 3611
chr5 4175424 2.30% 3702
chr6 5088367 2.98% 4553
chr7 3739632 2.35% 3476
chr8 3240733 2.23% 2997
chr9 3642734 2.63% 3246
chr10 3808077 2.85% 3475
chr11 4574625 3.39% 4058
chr12 3984056 2.99% 3553
chr13 1780311 1.56% 1618
chr14 2885578 2.70% 2538
chr15 2592582 2.54% 2402
chr16 2715021 3.01% 2550
chr17 4180209 5.02% 3633
chr17_GL000205v2_random 570 0.31% 2
chr18 1801993 2.24% 1621
chr19 3070204 5.24% 2714
chr20 2082295 3.23% 1888
chr21 983958 2.11% 902
chr22 1701301 3.35% 1571
chrUn_GL000195v1 730 0.40% 2
chrUn_GL000219v1 539 0.30% 1
chrX 2287299 1.47% 2240
chrY 79085 0.14% 77
3337 contigs with no values (128446938 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 73862 175 29352 1108.93 748
global segment-length histogram

Files

Filename Size md5
ENCFF393MNY.bed.gz 1.85 MB 2a36997df37619ee4ddbbba38f255bd0
ENCFF393MNY.tabix.bed.gz 816.26 KB 477facc65cf10a61be001c313a518222
ENCFF393MNY.tabix.bed.gz.tbi 247.12 KB 426c6bb064ca2441a59cad5f420f41df
genomic_resource.yaml 1.52 KB 1f52b7cdba458e869a7b288db4e9fe67
statistics/