Histone_ChIP-seq_ENCSR652QNW
Histone_ChIP-seq ENCSR652QNW [biosample_summary="Homo sapiens cardiac muscle cell originated from RUES2" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR652QNW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR652QNW [biosamplesummary="Homo sapiens cardiac muscle cell originated from RUES2" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: embryo output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN271ZDC|/analyses/ENCAN271ZDC/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF959PBV|/files/ENCFF959PBV/} processed by ChIP-seq ENCODE3 GRCh38 pipeline was generated from a library with PBC1 value of 0.90. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR652QNW | float |
Histone_ChIP-seq_ENCSR652QNW |
Histone_ChIP-seq ENCSR652QNW [biosample_summary="Homo sapiens cardiac muscle cell originated from RUES2" and target="H3K4me3"]
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[1.35, 37.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF905NTT.bed.gz | 653.83 KB | cfc37ba4bb777f3a556c2f1a12206d35 |
| ENCFF905NTT.bed.gz.dvc | 100.0 B | af1127c510384632a71dde389571f0bd |
| ENCFF905NTT.tabix.bed.gz | 267.53 KB | 5769e9301e17641484dce0425337ec07 |
| ENCFF905NTT.tabix.bed.gz.dvc | 106.0 B | 9169f6795984f82599f970911bc9703d |
| ENCFF905NTT.tabix.bed.gz.tbi | 143.32 KB | 058ad82e5a95d39064f929dda498a626 |
| ENCFF905NTT.tabix.bed.gz.tbi.dvc | 110.0 B | 1047f2737fc9c780c7bdec18e974b889 |
| genomic_resource.yaml | 2.13 KB | 6845e9e9352721ed84dff523b0442963 |
| genomic_resource_original.yaml | 1.99 KB | b4cf44fd790535e544c404468ff1589a |
| statistics/ |