Resource

Id Histone_ChIP-seq/ENCSR641SDIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR641SDI [biosample_summary="Homo sapiens sigmoid colon tissue female adult (51 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR641SDI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue female adult (51 years)
  • date_created: 2018-10-31T03:08:25.344813+00:00
  • date_released: 2018-12-11
  • doi: 10.17989/ENCSR641SDI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR641SDI float

Histone_ChIP-seq_ENCSR641SDI
Histone_ChIP-seq ENCSR641SDI [biosample_summary="Homo sapiens sigmoid colon tissue female adult (51 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR641SDI [1.44, 60.5]
n
157,732,283
mean
17.6
sd
12.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1577322834.90% 73437
chr1 15664314 6.29% 7133
chr2 12399707 5.12% 5788
chr3 10629754 5.36% 4864
chr4 7087079 3.73% 3415
chr5 7789376 4.29% 3743
chr6 7953213 4.66% 4079
chr7 7429275 4.66% 3659
chr8 6140122 4.23% 3157
chr9 7764758 5.61% 3338
chr10 9298291 6.95% 4138
chr11 8357073 6.19% 3672
chr12 8561688 6.42% 3706
chr13 3847274 3.36% 1823
chr14 5433389 5.08% 2386
chr15 5285893 5.18% 2583
chr16 5270853 5.83% 2452
chr17 7630079 9.16% 3282
chr18 3059041 3.81% 1544
chr19 5435643 9.27% 2429
chr20 4286504 6.65% 1988
chr21 1762470 3.77% 969
chr22 3345883 6.58% 1494
chrX 3300604 2.12% 1795
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 73437 215 187731 2147.86 1325
global segment-length histogram

Files

Filename Size md5
ENCFF558VBW.bed.gz 1.91 MB 2a037e8d20df6603c589edc58b9dbdf9
ENCFF558VBW.tabix.bed.gz 831.9 KB c60fd816e35614174f86341eb3993459
ENCFF558VBW.tabix.bed.gz.tbi 245.06 KB 134f715ce56faab69ad92e6539dc482b
genomic_resource.yaml 1.51 KB 11698f0cdc8bcc8d22c9de3da8eb7186
statistics/