Resource

Id Histone_ChIP-seq/ENCSR640XRVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR640XRV [biosample_summary="Homo sapiens transverse colon tissue male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR640XRV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue male adult (37 years)
  • date_created: 2017-07-28T10:06:10.449074+00:00
  • date_released: 2017-10-30
  • doi: 10.17989/ENCSR640XRV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR640XRV float

Histone_ChIP-seq_ENCSR640XRV
Histone_ChIP-seq ENCSR640XRV [biosample_summary="Homo sapiens transverse colon tissue male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR640XRV [1.43, 45.8]
n
55,539,724
mean
9.55
sd
6.26

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 555397241.73% 47839
chr1 5804469 2.33% 4845
chr2 3971431 1.64% 3520
chr3 3168838 1.60% 2831
chr4 2140598 1.13% 1983
chr5 2549535 1.40% 2227
chr6 3067267 1.80% 2640
chr7 2524061 1.58% 2190
chr8 1931085 1.33% 1760
chr9 2428613 1.75% 2121
chr10 2594543 1.94% 2253
chr11 3035414 2.25% 2493
chr12 2972389 2.23% 2471
chr13 1103492 0.96% 985
chr14 2043664 1.91% 1772
chr15 1918227 1.88% 1662
chr16 2202863 2.44% 1926
chr17 3380334 4.06% 2664
chr18 935379 1.16% 815
chr19 2980946 5.09% 2403
chr20 1565145 2.43% 1363
chr21 680088 1.46% 621
chr22 1372132 2.70% 1117
chrX 1124464 0.72% 1132
chrY 44747 0.08% 45
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47839 195 18440 1160.97 817
global segment-length histogram

Files

Filename Size md5
ENCFF117HMN.bed.gz 1.19 MB 71ca619be2a36d7a3b20fc7f5dad19d6
ENCFF117HMN.tabix.bed.gz 531.69 KB 6d1cd9ba82330bbaea9efde140b1ea63
ENCFF117HMN.tabix.bed.gz.tbi 188.03 KB ccbdf354fd2c7fd5464afa8311056f17
genomic_resource.yaml 1.51 KB 110bfca69a6e7e30261d4aea67a80efe
statistics/