Histone_ChIP-seq_ENCSR639NMN
Histone_ChIP-seq ENCSR639NMN [biosample_summary="Homo sapiens thyroid gland tissue male adult (54 years)" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR639NMN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR639NMN [biosamplesummary="Homo sapiens thyroid gland tissue male adult (54 years)" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: male adult (54 years) output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN612UHR|/analyses/ENCAN612UHR/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF883DYM|/files/ENCFF883DYM/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 32172723 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed alignments file {ENCFF596GFC|/files/ENCFF596GFC/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 40800385 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR639NMN | float |
Histone_ChIP-seq_ENCSR639NMN |
Histone_ChIP-seq ENCSR639NMN [biosample_summary="Homo sapiens thyroid gland tissue male adult (54 years)" and target="H3K4me1"]
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[1.64, 4.56] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF958DTC.bed.gz | 48.93 KB | 3ca806ae9c7e01edb19ac45bcf55a907 |
| ENCFF958DTC.bed.gz.dvc | 99.0 B | 2be491435aabb016c65257357d732632 |
| ENCFF958DTC.tabix.bed.gz | 28.18 KB | 24b291c14ad66f9a82f15d55963a380f |
| ENCFF958DTC.tabix.bed.gz.dvc | 105.0 B | 314c5b27e47beb412ea193f8c2c7ef0b |
| ENCFF958DTC.tabix.bed.gz.tbi | 30.95 KB | a30fc5a07ecdc38b51835db5d8dae564 |
| ENCFF958DTC.tabix.bed.gz.tbi.dvc | 109.0 B | 8ada071680745756e579a63c8198cfa2 |
| genomic_resource.yaml | 2.46 KB | 0ac070e35c65636d1d3debb45a4ae63b |
| genomic_resource_original.yaml | 2.32 KB | a9cba2a8f43b20e1374aed607ae5b266 |
| statistics/ |