Resource

Id Histone_ChIP-seq/ENCSR637RLNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR637RLN [biosample_summary="Homo sapiens hepatocyte originated from H9" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR637RLN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_CL_0000182/
  • biosample_summary: Homo sapiens hepatocyte originated from H9
  • date_created: 2016-04-11T19:00:44.234884+00:00
  • date_released: 2016-05-20
  • doi: 10.17989/ENCSR637RLN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female embryo (5 days)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR637RLN float

Histone_ChIP-seq_ENCSR637RLN
Histone_ChIP-seq ENCSR637RLN [biosample_summary="Homo sapiens hepatocyte originated from H9" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR637RLN [1.51, 8.77]
n
39,223,652
mean
3.82
sd
1.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 392236521.22% 37393
chr1 3807606 1.53% 3685
chr2 2963451 1.22% 2639
chr3 1851257 0.93% 1936
chr4 1523597 0.80% 1328
chr5 2109256 1.16% 1983
chr6 2277883 1.33% 1959
chr7 1967709 1.23% 1789
chr8 1627278 1.12% 1603
chr9 1701732 1.23% 1629
chr10 2335183 1.75% 2131
chr11 2316598 1.71% 2356
chr12 2220869 1.67% 2148
chr13 1067553 0.93% 954
chr14 1248357 1.17% 1169
chr15 1481306 1.45% 1537
chr16 1273715 1.41% 1324
chr17 2186835 2.63% 2034
chr18 780790 0.97% 796
chr19 1341318 2.29% 1233
chr20 1549616 2.40% 1565
chr21 303416 0.65% 271
chr22 852380 1.68% 938
chrX 435947 0.28% 386
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37393 175 34353 1048.96 622
global segment-length histogram

Files

Filename Size md5
ENCFF732JQO.bed.gz 752.3 KB c0821264aa15f3a392d29eac76d4a773
ENCFF732JQO.tabix.bed.gz 376.12 KB a6c2ea6adc48480820973e413b1eb4ad
ENCFF732JQO.tabix.bed.gz.tbi 121.9 KB 72cc0f13e77c7e4c881c027259cce3e4
genomic_resource.yaml 1.71 KB 469189ca17d42ab1f611fddf08598098
statistics/