Resource

Id Histone_ChIP-seq/ENCSR636IDRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR636IDR [biosample_summary="Homo sapiens sigmoid colon tissue male child (3 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR636IDR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue male child (3 years)
  • date_created: 2015-10-01T07:17:31.097135+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR636IDR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR636IDR float

Histone_ChIP-seq_ENCSR636IDR
Histone_ChIP-seq ENCSR636IDR [biosample_summary="Homo sapiens sigmoid colon tissue male child (3 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR636IDR [1.77, 11.9]
n
14,452,882
mean
4.42
sd
1.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 144528820.45% 30494
chr1 765441 0.31% 1707
chr2 834562 0.34% 1904
chr3 673335 0.34% 1595
chr4 813204 0.43% 1784
chr5 925494 0.51% 2029
chr6 639061 0.37% 1527
chr7 1031718 0.65% 2223
chr8 752825 0.52% 1720
chr9 475369 0.34% 1024
chr10 554016 0.41% 1226
chr11 572114 0.42% 1311
chr12 813555 0.61% 1732
chr13 379449 0.33% 936
chr14 361847 0.34% 871
chr15 420887 0.41% 892
chr16 497973 0.55% 1073
chr17 303399 0.36% 628
chr18 250963 0.31% 598
chr19 2561620 4.37% 3944
chr20 223667 0.35% 504
chr21 298575 0.64% 624
chr22 190816 0.38% 389
chrX 87104 0.06% 198
chrY 25888 0.05% 55
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30494 165 9324 473.96 383
global segment-length histogram

Files

Filename Size md5
ENCFF682HWV.bed.gz 572.43 KB f6375b50f88a0d46806506ebaf077b69
ENCFF682HWV.tabix.bed.gz 295.29 KB 73b71f7d437be3ad1212dbe681b2427d
ENCFF682HWV.tabix.bed.gz.tbi 157.28 KB 55103c1143f82416d844445fcacac679
genomic_resource.yaml 1.71 KB 73e341da66114acca4c30bcbd09df7fc
statistics/