Resource

Id Histone_ChIP-seq/ENCSR634DMEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR634DME [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR634DME
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (89 years)
  • date_created: 2021-04-30T04:18:14.175779+00:00
  • date_released: 2022-01-06
  • doi: 10.17989/ENCSR634DME
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (89 years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR634DME float

Histone_ChIP-seq_ENCSR634DME
Histone_ChIP-seq ENCSR634DME [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR634DME [1.79, 9.82]
n
14,152,057
mean
4.46
sd
1.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 141520570.44% 18765
chr1 677469 0.27% 739
chr2 779168 0.32% 795
chr3 282565 0.14% 339
chr4 481713 0.25% 453
chr5 576437 0.32% 586
chr6 851321 0.50% 846
chr7 628793 0.39% 549
chr8 394123 0.27% 439
chr9 345968 0.25% 364
chr10 574403 0.43% 585
chr11 332595 0.25% 359
chr12 498194 0.37% 544
chr13 255451 0.22% 271
chr14 430452 0.40% 496
chr15 363986 0.36% 441
chr16 351645 0.39% 422
chr17 631039 0.76% 614
chr18 192032 0.24% 224
chr19 400154 0.68% 513
chr20 339643 0.53% 405
chr21 158179 0.34% 204
chr22 129294 0.25% 173
chrX 4477433 2.87% 8404
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18765 170 16604 754.17 516
global segment-length histogram

Files

Filename Size md5
ENCFF276LSC.bed.gz 336.06 KB a24b4e1683f3515c289d4b7612cf4c5a
ENCFF276LSC.tabix.bed.gz 180.37 KB ab6356fdf89931d3271547f2eb51bd5a
ENCFF276LSC.tabix.bed.gz.tbi 80.83 KB 0043f99e1647ce79abd1847045b73b00
genomic_resource.yaml 1.71 KB cd872cf7ac5661e7c2d9821bd5c0eef6
statistics/