Resource

Id Histone_ChIP-seq/ENCSR632SLJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR632SLJ [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (37 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR632SLJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue male adult (37 years)
  • date_created: 2019-04-27T23:17:17.388980+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR632SLJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR632SLJ float

Histone_ChIP-seq_ENCSR632SLJ
Histone_ChIP-seq ENCSR632SLJ [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (37 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR632SLJ [1.41, 10.7]
n
4,417,197
mean
4
sd
0.992

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 44171970.14% 10684
chr1 382160 0.15% 961
chr1_KI270709v1_random 479 0.72% 2
chr1_KI270712v1_random 2807 1.59% 13
chr1_KI270714v1_random 178 0.43% 1
chr2 382775 0.16% 834
chr3 170657 0.09% 475
chr4 178059 0.09% 491
chr5 235142 0.13% 617
chr6 257375 0.15% 694
chr7 252517 0.16% 558
chr8 187404 0.13% 451
chr9 235376 0.17% 522
chr10 243276 0.18% 529
chr11 195752 0.14% 511
chr12 184316 0.14% 483
chr13 129583 0.11% 295
chr14 139973 0.13% 339
chr15 136528 0.13% 306
chr16 139929 0.15% 336
chr17 277122 0.33% 609
chr17_GL000205v2_random 1416 0.76% 1
chr18 65752 0.08% 191
chr19 312893 0.53% 694
chr20 156232 0.24% 393
chr21 40042 0.09% 105
chr22 90792 0.18% 218
chr22_KI270732v1_random 340 0.82% 1
chr22_KI270733v1_random 342 0.19% 2
chrM 614 3.71% 1
chrUn_GL000219v1 333 0.19% 1
chrUn_GL000224v1 230 0.13% 1
chrUn_KI270333v1 1918 71.06% 5
chrUn_KI270336v1 715 69.69% 2
chrUn_KI270337v1 770 68.69% 2
chrUn_KI270438v1 343 0.30% 1
chrUn_KI270466v1 760 61.64% 2
chrUn_KI270467v1 2038 51.99% 4
chrUn_KI270591v1 136 2.35% 1
chrUn_KI270744v1 377 0.22% 2
chrX 9746 0.01% 30
3326 contigs with no values (184940742 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10684 90 4679 413.44 297
global segment-length histogram

Files

Filename Size md5
ENCFF958RHA.bed.gz 198.64 KB 1858e7ed7c0c0b022943c5ba9788865a
ENCFF958RHA.tabix.bed.gz 103.88 KB f96e2ee055646b0807d6f3284aaea0af
ENCFF958RHA.tabix.bed.gz.tbi 54.46 KB 8eb28e78187367d020c47edf89100d74
genomic_resource.yaml 1.51 KB f3865ea44ae69ceb046548823f3b895d
statistics/