Histone_ChIP-seq_ENCSR631RJR
Histone_ChIP-seq ENCSR631RJR [biosample_summary="Homo sapiens H1" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR631RJR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR631RJR [biosamplesummary="Homo sapiens H1" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN101UXC|/analyses/ENCAN101UXC/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF322LHI|/files/ENCFF322LHI/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 13910242 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF108LUT|/files/ENCFF108LUT/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 7353664 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR631RJR | float |
Histone_ChIP-seq_ENCSR631RJR |
Histone_ChIP-seq ENCSR631RJR [biosample_summary="Homo sapiens H1" and target="H3K4me1"]
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[1.92, 13.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF558IKG.bed.gz | 1.2 MB | fde92ba19a36b3ed2e7705766b737ed0 |
| ENCFF558IKG.bed.gz.dvc | 101.0 B | 7f38063e2e90ca8f12cc6351fb4549bc |
| ENCFF558IKG.tabix.bed.gz | 666.81 KB | 21ee409b355c7c0665d53d359d8aef8e |
| ENCFF558IKG.tabix.bed.gz.dvc | 106.0 B | 58f5dc8b389a17a6f56aa84916081451 |
| ENCFF558IKG.tabix.bed.gz.tbi | 255.55 KB | 991f3c8ca022204381c88816730e9f5f |
| ENCFF558IKG.tabix.bed.gz.tbi.dvc | 110.0 B | 646a726b18625df705b2a6128c64ce2d |
| genomic_resource.yaml | 2.36 KB | 7afe846c9f218dccd2320edf55aabad7 |
| genomic_resource_original.yaml | 2.25 KB | 8f8aed7dac0bfd61e20fb7cb83869616 |
| statistics/ |