Resource

Id Histone_ChIP-seq/ENCSR627STEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR627STE [biosample_summary="Homo sapiens brain tissue male embryo (122 days)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR627STE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000955/
  • biosample_summary: Homo sapiens brain tissue male embryo (122 days)
  • date_created: 2015-09-15T19:51:52.321056+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR627STE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (122 days)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR627STE float

Histone_ChIP-seq_ENCSR627STE
Histone_ChIP-seq ENCSR627STE [biosample_summary="Homo sapiens brain tissue male embryo (122 days)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR627STE [2.04, 21.5]
n
16,943,010
mean
5.91
sd
2.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 169430100.53% 33065
chr1 1458745 0.59% 2952
chr2 1220010 0.50% 2234
chr3 691466 0.35% 1384
chr4 668449 0.35% 1177
chr5 1193176 0.66% 2168
chr6 1427276 0.84% 2402
chr7 839444 0.53% 1408
chr8 621749 0.43% 1211
chr9 647586 0.47% 1237
chr10 1127729 0.84% 2168
chr11 694133 0.51% 1455
chr12 934331 0.70% 1861
chr13 413724 0.36% 796
chr14 646013 0.60% 1203
chr15 581073 0.57% 1119
chr16 698110 0.77% 1529
chr17 1000837 1.20% 1987
chr18 369327 0.46% 751
chr19 616136 1.05% 1562
chr20 662316 1.03% 1489
chr21 163550 0.35% 314
chr22 173660 0.34% 438
chrX 93857 0.06% 219
chrY 313 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 33065 180 12509 512.42 340
global segment-length histogram

Files

Filename Size md5
ENCFF290BLP.bed.gz 579.66 KB 7fb2142af84fcf8fd3e75d611e24f0e6
ENCFF290BLP.tabix.bed.gz 311.87 KB d28d6e4fa5714308f0ba214ce33981d4
ENCFF290BLP.tabix.bed.gz.tbi 93.5 KB 6f33d1a06617cb6a0cc48c8e4095cf9e
genomic_resource.yaml 2.19 KB 07e9edb68b9cb710d3e5223a46f9ae34
statistics/