Resource

Id Histone_ChIP-seq/ENCSR623YMOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR623YMO [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR623YMO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue female adult (51 years)
  • date_created: 2018-05-11T18:46:49.196455+00:00
  • date_released: 2018-12-11
  • doi: 10.17989/ENCSR623YMO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR623YMO float

Histone_ChIP-seq_ENCSR623YMO
Histone_ChIP-seq ENCSR623YMO [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR623YMO [1.38, 16]
n
37,940,200
mean
4.78
sd
2.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 379402001.18% 40768
chr1 2168552 0.87% 2512
chr2 2341763 0.97% 2875
chr3 1974399 1.00% 2428
chr4 2152778 1.13% 2574
chr5 2459249 1.35% 2644
chr6 1617323 0.95% 2073
chr7 2413684 1.51% 2665
chr8 1893203 1.30% 2075
chr9 1278135 0.92% 1427
chr10 1450653 1.08% 1663
chr11 1586443 1.17% 1764
chr12 2004833 1.50% 1887
chr13 921972 0.81% 1185
chr14 947142 0.88% 1150
chr15 930691 0.91% 963
chr16 1172075 1.30% 1158
chr17 695621 0.84% 712
chr18 676962 0.84% 824
chr19 5364213 9.15% 3311
chr20 623705 0.97% 713
chr21 522312 1.12% 648
chr22 433331 0.85% 501
chrX 2311161 1.48% 3016
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40768 210 58069 930.64 666
global segment-length histogram

Files

Filename Size md5
ENCFF080ZRB.bed.gz 803.34 KB 1e913940ce7772f34be67f85584131ce
ENCFF080ZRB.tabix.bed.gz 411.4 KB 8e1dea5e4ef0d27561fb0ccfb3dda73a
ENCFF080ZRB.tabix.bed.gz.tbi 208.07 KB 859735fec7c88b212f60b378398e418c
genomic_resource.yaml 1.76 KB 519c224c999673b8264ef30584a38124
statistics/