Resource

Id Histone_ChIP-seq/ENCSR622QCUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR622QCU [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR622QCU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (89 years)
  • date_created: 2021-01-28T04:10:57.607387+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR622QCU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (89 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR622QCU float

Histone_ChIP-seq_ENCSR622QCU
Histone_ChIP-seq ENCSR622QCU [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (89 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR622QCU [1.84, 44.4]
n
39,237,534
mean
17
sd
8.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 392375341.22% 26043
chr1 3835812 1.54% 2497
chr2 2818516 1.16% 1926
chr3 2390960 1.21% 1530
chr4 1689709 0.89% 1092
chr5 1967779 1.08% 1268
chr6 2347698 1.37% 1546
chr7 1903379 1.19% 1312
chr8 1512495 1.04% 1029
chr9 1645170 1.19% 1100
chr10 1718074 1.28% 1135
chr11 2059464 1.52% 1332
chr12 1990100 1.49% 1288
chr13 944916 0.83% 616
chr14 1292957 1.21% 846
chr15 1227184 1.20% 837
chr16 1485226 1.64% 1024
chr17 2095117 2.52% 1362
chr18 802735 1.00% 560
chr19 2270303 3.87% 1511
chr20 955725 1.48% 663
chr21 397824 0.85% 285
chr22 775734 1.53% 530
chrX 1110657 0.71% 754
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26043 215 26626 1506.64 1270
global segment-length histogram

Files

Filename Size md5
ENCFF706DGK.bed.gz 629.48 KB baee6cfa1d72470947f4ec8a6f6aa807
ENCFF706DGK.tabix.bed.gz 289.08 KB 0afe61b138456156046b2bd5e1180219
ENCFF706DGK.tabix.bed.gz.tbi 165.4 KB 03b5783306dcd142d0c24981d6426e06
genomic_resource.yaml 1.57 KB bfc09272eb809db13276484c25eda897
statistics/