Resource

Id Histone_ChIP-seq/ENCSR621FNMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR621FNM [biosample_summary="Homo sapiens foreskin keratinocyte male newborn (2-4 days)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR621FNM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_1001606/
  • biosample_summary: Homo sapiens foreskin keratinocyte male newborn (2-4 days)
  • date_created: 2016-12-07T00:46:13.336391+00:00
  • date_released: 2017-10-10
  • doi: 10.17989/ENCSR621FNM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary: male newborn (2-4 days)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR621FNM float

Histone_ChIP-seq_ENCSR621FNM
Histone_ChIP-seq ENCSR621FNM [biosample_summary="Homo sapiens foreskin keratinocyte male newborn (2-4 days)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR621FNM [1.36, 18.9]
n
94,350,907
mean
4.37
sd
2.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 943509072.93% 107252
chr1 9447254 3.79% 10747
chr2 7816303 3.23% 9090
chr3 6239282 3.15% 7556
chr4 4381657 2.30% 5303
chr5 5196782 2.86% 6049
chr6 5712145 3.34% 6393
chr7 4690723 2.94% 5454
chr8 3893659 2.68% 4627
chr9 4208385 3.04% 4732
chr10 4934727 3.69% 5620
chr11 5721108 4.24% 6635
chr12 3840264 2.88% 4337
chr13 2381767 2.08% 2706
chr14 3294615 3.08% 3698
chr15 4051217 3.97% 4467
chr16 2404778 2.66% 2718
chr17 4673876 5.61% 4617
chr18 1828414 2.27% 2198
chr19 2072468 3.54% 2062
chr20 4172331 6.47% 4391
chr21 1065774 2.28% 1225
chr22 1814492 3.57% 2122
chrX 506378 0.32% 501
chrY 2508 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 107252 173 65836 879.71 505
global segment-length histogram

Files

Filename Size md5
ENCFF971QNY.bed.gz 2.16 MB 7e40b0299f1778e56fb6dbcd8b760b4a
ENCFF971QNY.tabix.bed.gz 1.05 MB aac684c4426ec78f8fc9645f9381a119
ENCFF971QNY.tabix.bed.gz.tbi 221.56 KB df6a7bbb4f25154430d04510fc0b827f
genomic_resource.yaml 1.74 KB 0b274c4c5f6ac0a66b1bd207a4bfe32e
statistics/