Resource

Id Histone_ChIP-seq/ENCSR621EXDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR621EXD [biosample_summary="Homo sapiens foreskin fibroblast male newborn" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR621EXD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_1001608/
  • biosample_summary: Homo sapiens foreskin fibroblast male newborn
  • date_created: 2015-09-15T20:26:41.839553+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR621EXD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male newborn
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR621EXD float

Histone_ChIP-seq_ENCSR621EXD
Histone_ChIP-seq ENCSR621EXD [biosample_summary="Homo sapiens foreskin fibroblast male newborn" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR621EXD [1.64, 26.8]
n
142,031,662
mean
5.71
sd
2.45

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1420316624.41% 216187
chr1 13609999 5.47% 21052
chr1_KI270709v1_random 635 0.95% 1
chr1_KI270711v1_random 1391 3.30% 3
chr1_KI270712v1_random 1246 0.71% 3
chr2 9512851 3.93% 16679
chr3 7724504 3.90% 12981
chr4 4196503 2.21% 7468
chr5 6130639 3.38% 10446
chr6 5383110 3.15% 9399
chr7 6920147 4.34% 10674
chr8 4490530 3.09% 7299
chr9 6663616 4.81% 9614
chr9_KI270718v1_random 391 1.03% 2
chr9_KI270719v1_random 616 0.35% 3
chr10 6085583 4.55% 9978
chr11 7604960 5.63% 10983
chr12 7867526 5.90% 11591
chr13 2399367 2.10% 4496
chr14 4396035 4.11% 7150
chr14_GL000009v2_random 184 0.09% 1
chr14_GL000194v1_random 1442 0.75% 6
chr14_GL000225v1_random 1200 0.57% 4
chr15 5164971 5.06% 8831
chr16 8051844 8.91% 10500
chr16_KI270728v1_random 246 0.01% 1
chr17 9863733 11.85% 13627
chr17_GL000205v2_random 652 0.35% 2
chr18 1784732 2.22% 3370
chr19 11897787 20.30% 12596
chr20 4470398 6.94% 6324
chr21 1627107 3.48% 2341
chr22 4613249 9.08% 5613
chr22_KI270733v1_random 426 0.24% 2
chr22_KI270736v1_random 689 0.38% 3
chrUn_GL000195v1 261 0.14% 1
chrUn_GL000216v2 236 0.13% 1
chrUn_KI270442v1 1450 0.37% 5
chrUn_KI270519v1 200 0.14% 1
chrUn_KI270589v1 327 0.74% 1
chrUn_KI270744v1 176 0.10% 1
chrUn_KI270751v1 179 0.12% 1
chrX 1495048 0.96% 2966
chrY 65476 0.11% 167
3323 contigs with no values (124299301 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 216187 140 30085 656.99 401
global segment-length histogram

Files

Filename Size md5
ENCFF850LVQ.bed.gz 4.23 MB b0692e57857e9d9439996f9f17c6e69a
ENCFF850LVQ.tabix.bed.gz 2.06 MB 47776d217f58a34f7cb32a16f38f3c95
ENCFF850LVQ.tabix.bed.gz.tbi 227.42 KB a2fa42a2ab56bb37bc985a947fed87f7
genomic_resource.yaml 1.46 KB 2b235c0f8f126917cfe1376bb3ccdb41
statistics/