Resource

Id Histone_ChIP-seq/ENCSR619YUYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR619YUY [biosample_summary="Homo sapiens iPS-15b" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR619YUY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007102/
  • biosample_summary: Homo sapiens iPS-15b
  • date_created: 2015-09-15T19:51:30.262641+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR619YUY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR619YUY float

Histone_ChIP-seq_ENCSR619YUY
Histone_ChIP-seq ENCSR619YUY [biosample_summary="Homo sapiens iPS-15b" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR619YUY [1.5, 23]
n
42,376,409
mean
6.02
sd
2.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 423764091.32% 77195
chr1 4132099 1.66% 7347
chr1_KI270709v1_random 303 0.45% 1
chr2 2370598 0.98% 4727
chr3 2235469 1.13% 4213
chr4 1184683 0.62% 2421
chr5 1807806 1.00% 3410
chr6 1638381 0.96% 3110
chr7 2007175 1.26% 3783
chr8 1275725 0.88% 2469
chr9 1901260 1.37% 3507
chr10 1518190 1.13% 2972
chr11 2353541 1.74% 4160
chr12 2366607 1.78% 4236
chr13 585082 0.51% 1257
chr14 1250508 1.17% 2435
chr14_GL000225v1_random 1478 0.70% 5
chr15 1307222 1.28% 2435
chr16 2478921 2.74% 4197
chr17 2846687 3.42% 4875
chr17_GL000205v2_random 522 0.28% 1
chr18 447437 0.56% 966
chr19 3883559 6.63% 6167
chr20 1496556 2.32% 2587
chr21 587664 1.26% 1032
chr22 1639024 3.23% 2734
chrUn_GL000195v1 204 0.11% 1
chrUn_KI270442v1 928 0.24% 3
chrX 1058510 0.68% 2143
chrY 270 <0.01% 1
3337 contigs with no values (128038504 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77195 170 32769 548.95 412
global segment-length histogram

Files

Filename Size md5
ENCFF391ZTW.bed.gz 1.31 MB ed8f363e9b03fb95cc4af50d6b2abc98
ENCFF391ZTW.tabix.bed.gz 701.37 KB e56818b68808da51b11dd11afd951e6c
ENCFF391ZTW.tabix.bed.gz.tbi 167.25 KB 60c2f12da6843b5b2b47cb5a3ba2158e
genomic_resource.yaml 1.88 KB 3ae4702006228f04b131e729549113f2
statistics/