Resource

Id Histone_ChIP-seq/ENCSR619TOUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR619TOU [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue male adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR619TOU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue male adult (90 or above years)
  • date_created: 2022-05-11T01:53:46.704509+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR619TOU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (90 or above years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR619TOU float

Histone_ChIP-seq_ENCSR619TOU
Histone_ChIP-seq ENCSR619TOU [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue male adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR619TOU [1.87, 61.9]
n
125,303,905
mean
10.5
sd
7.67

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1253039053.89% 102648
chr1 12620945 5.07% 9983
chr2 9106944 3.76% 7767
chr3 7651016 3.86% 6417
chr4 4689480 2.47% 4095
chr5 6650080 3.66% 5542
chr6 6490990 3.80% 5462
chr7 5697749 3.58% 5095
chr8 5098873 3.51% 4312
chr9 5859096 4.23% 4699
chr10 6406300 4.79% 5130
chr11 7683177 5.69% 5928
chr12 6427595 4.82% 5295
chr13 2880646 2.52% 2551
chr14 4222825 3.94% 3428
chr15 4269218 4.19% 3476
chr16 4550048 5.04% 3738
chr17 7212131 8.66% 5376
chr18 2429463 3.02% 2138
chr19 5406373 9.22% 3999
chr20 3657556 5.68% 2959
chr21 1324343 2.84% 1126
chr22 3206555 6.31% 2475
chrX 1724743 1.11% 1624
chrY 37759 0.07% 33
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 102648 185 41518 1220.71 781
global segment-length histogram

Files

Filename Size md5
ENCFF586OIU.bed.gz 2.17 MB 4b8b998a8a46e7fd2b201e6465aca143
ENCFF586OIU.tabix.bed.gz 1.03 MB 4310236f237b7e6da56aa1b4b4b1b884
ENCFF586OIU.tabix.bed.gz.tbi 283.17 KB 76d365bc13ab3f9966447cf794372190
genomic_resource.yaml 1.74 KB a0eb5211b89b846bb826106fe12188aa
statistics/