Resource

Id Histone_ChIP-seq/ENCSR619POCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR619POC [biosample_summary="Homo sapiens chorionic villus tissue male embryo (38 weeks)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR619POC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0007106/
  • biosample_summary: Homo sapiens chorionic villus tissue male embryo (38 weeks)
  • date_created: 2017-03-22T16:16:45.009690+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR619POC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (38 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR619POC float

Histone_ChIP-seq_ENCSR619POC
Histone_ChIP-seq ENCSR619POC [biosample_summary="Homo sapiens chorionic villus tissue male embryo (38 weeks)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR619POC [1.8, 21.8]
n
71,493,169
mean
6.62
sd
2.73

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 714931692.22% 89087
chr1 7762811 3.12% 9305
chr2 5295968 2.19% 6686
chr3 4447045 2.24% 5620
chr4 2468892 1.30% 3346
chr5 3569825 1.97% 4587
chr6 3987096 2.33% 5238
chr7 3900956 2.45% 4996
chr8 2930846 2.02% 3739
chr9 3374911 2.44% 4121
chr10 3184319 2.38% 3964
chr11 4099149 3.03% 4709
chr12 3281948 2.46% 4137
chr13 1368614 1.20% 1955
chr14 2815453 2.63% 3342
chr15 2339223 2.29% 2857
chr16 2685744 2.97% 3094
chr17 3363688 4.04% 3861
chr18 1093601 1.36% 1518
chr19 3291935 5.62% 4017
chr20 2199883 3.41% 2544
chr21 793743 1.70% 1008
chr22 1922267 3.78% 2087
chrX 1268919 0.81% 2260
chrY 46333 0.08% 96
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 89087 165 18719 802.51 577
global segment-length histogram

Files

Filename Size md5
ENCFF645UIY.bed.gz 1.75 MB 0fe3d5be267318313a0e876b128d8a4d
ENCFF645UIY.tabix.bed.gz 881.77 KB 0cd615c9dcf47f62a1e1779d6d297c28
ENCFF645UIY.tabix.bed.gz.tbi 198.1 KB 42e16e43792705f555d04cba27f58493
genomic_resource.yaml 1.52 KB f25cec6b1804f9d3c5cafc0d73ff4045
statistics/