Histone_ChIP-seq_ENCSR615YKN
Histone_ChIP-seq ENCSR615YKN [biosample_summary="Homo sapiens UCSF-4" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR615YKN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR615YKN [biosamplesummary="Homo sapiens UCSF-4" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN687CZE|/analyses/ENCAN687CZE/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed redacted alignments file {ENCFF294ILE|/files/ENCFF294ILE/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 29903749 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed redacted alignments file {ENCFF911BTN|/files/ENCFF911BTN/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 24905666 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR615YKN | float |
Histone_ChIP-seq_ENCSR615YKN |
Histone_ChIP-seq ENCSR615YKN [biosample_summary="Homo sapiens UCSF-4" and target="H3K4me1"]
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[1.75, 16.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF251UPB.bed.gz | 3.97 MB | 652916eff76f375acfb191c68868f532 |
| ENCFF251UPB.bed.gz.dvc | 101.0 B | 0eec722fe5b65c8b3fa07bec7e834271 |
| ENCFF251UPB.tabix.bed.gz | 1.94 MB | 751dcace36455a71366743716b9c0fa7 |
| ENCFF251UPB.tabix.bed.gz.dvc | 107.0 B | 97f2ecaf61e9165a4bb7e4df3dc83d74 |
| ENCFF251UPB.tabix.bed.gz.tbi | 461.24 KB | 814d0a796b930c57b203df24b896e5c4 |
| ENCFF251UPB.tabix.bed.gz.tbi.dvc | 110.0 B | ef2f2721ea8bb7bf0a83e1c3c14e8a27 |
| genomic_resource.yaml | 2.39 KB | 6091eeb71ee6b84cd99df6c51596ec99 |
| genomic_resource_original.yaml | 2.28 KB | 80caf14354c58e45cb2bc68a1802ab01 |
| statistics/ |