Resource

Id Histone_ChIP-seq/ENCSR612WDGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR612WDG [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR612WDG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:24.226692+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR612WDG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR612WDG float

Histone_ChIP-seq_ENCSR612WDG
Histone_ChIP-seq ENCSR612WDG [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR612WDG [1.37, 14]
n
219,925,110
mean
4.33
sd
1.57

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2199251106.84% 253747
chr1 20809915 8.36% 23661
chr1_KI270711v1_random 5369 12.72% 5
chr1_KI270713v1_random 282 0.69% 1
chr1_KI270714v1_random 607 1.46% 2
chr2 17434154 7.20% 21359
chr3 13492398 6.80% 16555
chr4 8800656 4.63% 12072
chr5 11794497 6.50% 14389
chr6 9336456 5.47% 12381
chr7 11368661 7.13% 13747
chr8 11031679 7.60% 11735
chr9 9546347 6.90% 10969
chr10 10404069 7.78% 12621
chr11 9803938 7.26% 10857
chr12 11314893 8.49% 12680
chr13 4927669 4.31% 6473
chr14 6985729 6.53% 8497
chr14_GL000194v1_random 3743 1.95% 6
chr15 7879654 7.73% 9487
chr16 9311410 10.31% 9183
chr17 11524134 13.84% 11798
chr17_GL000205v2_random 1876 1.01% 4
chr18 4228112 5.26% 5462
chr19 12499972 21.32% 9393
chr20 6086000 9.44% 6537
chr21 2816526 6.03% 3350
chr22 5004490 9.85% 4933
chr22_KI270735v1_random 395 0.92% 1
chr22_KI270738v1_random 333 0.34% 1
chrUn_GL000195v1 3750 2.05% 10
chrUn_GL000214v1 376 0.27% 1
chrUn_GL000219v1 19583 10.93% 27
chrUn_GL000224v1 1373 0.76% 3
chrUn_KI270435v1 255 0.27% 1
chrUn_KI270438v1 298 0.26% 1
chrUn_KI270442v1 725 0.18% 2
chrUn_KI270519v1 532 0.39% 2
chrUn_KI270580v1 319 20.54% 1
chrUn_KI270744v1 563 0.33% 2
chrUn_KI270753v1 274 0.44% 1
chrX 3483098 2.23% 5537
3325 contigs with no values (184012433 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 253747 250 43369 866.71 491
global segment-length histogram

Files

Filename Size md5
ENCFF496CTO.bed.gz 4.7 MB ad1a9bf446dcac67fc24671b7669c911
ENCFF496CTO.tabix.bed.gz 2.36 MB 1eac182597a4e7aea87e22f2ed5eeb60
ENCFF496CTO.tabix.bed.gz.tbi 266.3 KB 42ba196b7c9ccfa3334085beeac737bb
genomic_resource.yaml 3.12 KB 5d86e0f7a32f5ce6a4113f6d8c166f24
statistics/