Resource

Id Histone_ChIP-seq/ENCSR611DJQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR611DJQ [biosample_summary="Homo sapiens testis tissue male adult (37 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR611DJQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000473/
  • biosample_summary: Homo sapiens testis tissue male adult (37 years)
  • date_created: 2017-07-28T10:05:18.003154+00:00
  • date_released: 2017-08-28
  • doi: 10.17989/ENCSR611DJQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR611DJQ float

Histone_ChIP-seq_ENCSR611DJQ
Histone_ChIP-seq ENCSR611DJQ [biosample_summary="Homo sapiens testis tissue male adult (37 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR611DJQ [1.74, 42.1]
n
49,188,427
mean
14
sd
8.73

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 491884271.53% 33963
chr1 4553130 1.83% 3058
chr2 3507648 1.45% 2337
chr3 2725098 1.37% 1855
chr4 2292878 1.21% 1717
chr5 2467407 1.36% 1726
chr6 3034076 1.78% 2084
chr7 2502333 1.57% 1805
chr8 2037529 1.40% 1465
chr9 1971926 1.42% 1398
chr10 2151358 1.61% 1480
chr11 2448658 1.81% 1641
chr12 2491351 1.87% 1676
chr13 1245336 1.09% 940
chr14 1621352 1.51% 1073
chr15 1627277 1.60% 1098
chr16 1793692 1.99% 1241
chr17 2572376 3.09% 1667
chr18 1000051 1.24% 746
chr19 3108108 5.30% 2161
chr20 1265570 1.96% 891
chr21 500042 1.07% 374
chr22 982210 1.93% 698
chrX 1243490 0.80% 804
chrY 45531 0.08% 28
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 33963 282 16883 1448.29 1202
global segment-length histogram

Files

Filename Size md5
ENCFF612RSR.bed.gz 852.51 KB 25d141e5ab2fa277c4730de5bdfc09a2
ENCFF612RSR.tabix.bed.gz 382.65 KB 1de69be0e1f68693f6edb68f01ffcd4a
ENCFF612RSR.tabix.bed.gz.tbi 214.28 KB a78c8fb807feadd403a84e338abd05a3
genomic_resource.yaml 1.7 KB b6d51b8313f38e406e3fda787287ead7
statistics/