Resource

Id Histone_ChIP-seq/ENCSR605QAVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR605QAV [biosample_summary="Homo sapiens adrenal gland tissue female adult (53 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR605QAV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (53 years)
  • date_created: 2016-10-19T23:11:48.221899+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR605QAV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR605QAV float

Histone_ChIP-seq_ENCSR605QAV
Histone_ChIP-seq ENCSR605QAV [biosample_summary="Homo sapiens adrenal gland tissue female adult (53 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR605QAV [1.26, 41.7]
n
48,774,691
mean
16.5
sd
8.52

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 487746911.52% 30556
chr1 4782162 1.92% 2948
chr1_KI270712v1_random 2533 1.44% 3
chr1_KI270713v1_random 642 1.58% 1
chr1_KI270714v1_random 496 1.19% 1
chr2 3425567 1.41% 2104
chr3 2798607 1.41% 1766
chr4 2041701 1.07% 1290
chr5 2407193 1.33% 1483
chr6 2807167 1.64% 1739
chr7 2411994 1.51% 1541
chr8 1837110 1.27% 1184
chr9 2035675 1.47% 1286
chr9_KI270717v1_random 466 1.16% 1
chr10 2100728 1.57% 1344
chr11 2585160 1.91% 1528
chr12 2717668 2.04% 1658
chr13 1048085 0.92% 700
chr14 1528451 1.43% 943
chr15 1577798 1.55% 989
chr16 1748361 1.94% 1086
chr17 2673704 3.21% 1631
chr17_GL000205v2_random 2869 1.55% 2
chr17_KI270729v1_random 839 0.30% 2
chr18 898507 1.12% 583
chr19 3138120 5.35% 2114
chr20 1234249 1.92% 779
chr21 508187 1.09% 332
chr22 1023412 2.01% 638
chr22_KI270733v1_random 486 0.27% 1
chrM 8185 49.40% 4
chrUn_GL000195v1 511 0.28% 1
chrUn_GL000218v1 352 0.22% 1
chrUn_GL000219v1 5857 3.27% 6
chrUn_KI270438v1 251 0.22% 1
chrX 1421598 0.91% 866
3331 contigs with no values (184707416 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30556 220 27659 1596.24 1234
global segment-length histogram

Files

Filename Size md5
ENCFF955TUJ.bed.gz 819.79 KB bd11acb12d4218039e09c5ef22fba24a
ENCFF955TUJ.tabix.bed.gz 352.63 KB 799e1c3df7bbc098f40843005d0a9e67
ENCFF955TUJ.tabix.bed.gz.tbi 186.68 KB 7a27071bbd59d70351d87fa3417639ea
genomic_resource.yaml 1.51 KB d04de37dd7abef74e8ba29a450edafba
statistics/