Resource

Id Histone_ChIP-seq/ENCSR597BWLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR597BWL [biosample_summary="Homo sapiens thyroid gland tissue male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR597BWL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002046/
  • biosample_summary: Homo sapiens thyroid gland tissue male adult (37 years)
  • date_created: 2016-03-19T00:36:00.359368+00:00
  • date_released: 2016-05-23
  • doi: 10.17989/ENCSR597BWL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR597BWL float

Histone_ChIP-seq_ENCSR597BWL
Histone_ChIP-seq ENCSR597BWL [biosample_summary="Homo sapiens thyroid gland tissue male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR597BWL [1.28, 18.8]
n
22,675,949
mean
4.92
sd
2.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 226759490.70% 29918
chr1 2374684 0.95% 3076
chr2 1599587 0.66% 2091
chr3 1356724 0.68% 1801
chr4 796507 0.42% 1108
chr5 923247 0.51% 1216
chr6 1255922 0.74% 1652
chr7 937514 0.59% 1248
chr8 873892 0.60% 1169
chr9 1010483 0.73% 1321
chr10 1164187 0.87% 1494
chr11 1337529 0.99% 1753
chr12 1223187 0.92% 1500
chr13 395920 0.35% 568
chr14 887008 0.83% 1130
chr15 825800 0.81% 1102
chr16 915926 1.01% 1260
chr17 1405156 1.69% 1783
chr18 369420 0.46% 524
chr19 1131467 1.93% 1507
chr20 734985 1.14% 971
chr21 199736 0.43% 274
chr22 677729 1.33% 896
chrUn_GL000219v1 1022 0.57% 1
chrUn_KI270337v1 483 43.09% 1
chrUn_KI270438v1 299 0.27% 1
chrUn_KI270466v1 949 76.97% 2
chrUn_KI270467v1 1568 40.00% 1
chrX 263189 0.17% 452
chrY 11829 0.02% 16
3337 contigs with no values (128779108 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29918 255 13594 757.94 586
global segment-length histogram

Files

Filename Size md5
ENCFF120SGY.bed.gz 677.56 KB 907821c409a03dce80670bb087b390c3
ENCFF120SGY.tabix.bed.gz 321.04 KB 678306bcdf2c39083469db2d93617173
ENCFF120SGY.tabix.bed.gz.tbi 141.39 KB 2169e05cc2c2b5ffd7187fe48bfa7758
genomic_resource.yaml 1.98 KB 0d73cddcf4cc60d6eaccf9d3e6aa6661
statistics/