Resource

Id Histone_ChIP-seq/ENCSR596TFHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR596TFH [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR596TFH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue female adult (46 years)
  • date_created: 2020-05-01T02:13:31.282719+00:00
  • date_released: 2020-09-15
  • doi: 10.17989/ENCSR596TFH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (46 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR596TFH float

Histone_ChIP-seq_ENCSR596TFH
Histone_ChIP-seq ENCSR596TFH [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR596TFH [1.74, 11.5]
n
23,328,120
mean
4.05
sd
0.978

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 233281200.73% 35413
chr1 2349688 0.94% 3560
chr2 1451190 0.60% 2352
chr3 1245755 0.63% 2016
chr4 652369 0.34% 1147
chr5 993721 0.55% 1646
chr6 902181 0.53% 1503
chr7 992440 0.62% 1567
chr8 661383 0.46% 1091
chr9 1048063 0.76% 1541
chr10 936526 0.70% 1524
chr11 1240312 0.92% 1853
chr12 1472792 1.11% 2205
chr13 357068 0.31% 623
chr14 802006 0.75% 1251
chr15 799387 0.78% 1272
chr16 1256888 1.39% 1819
chr17 1545322 1.86% 2270
chr18 247002 0.31% 425
chr19 2554106 4.36% 2970
chr20 681799 1.06% 1039
chr21 260780 0.56% 429
chr22 716667 1.41% 1040
chrX 160675 0.10% 270
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35413 215 13882 658.74 526
global segment-length histogram

Files

Filename Size md5
ENCFF242KAE.bed.gz 659.09 KB 9ea7f217eb6fe52c392245a2234c5680
ENCFF242KAE.tabix.bed.gz 346.57 KB 95c94191c936916ce1fd09837bbc9243
ENCFF242KAE.tabix.bed.gz.tbi 115.42 KB 93eaa76f319f93b2b7e637eda1a72171
genomic_resource.yaml 2.24 KB 67b066581a70c8c51f8ed8d6ac75ee79
statistics/