Resource

Id Histone_ChIP-seq/ENCSR596BHNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR596BHN [biosample_summary="Homo sapiens right cardiac atrium tissue male adult (34 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR596BHN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002078/
  • biosample_summary: Homo sapiens right cardiac atrium tissue male adult (34 years)
  • date_created: 2015-10-01T07:17:30.576754+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR596BHN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR596BHN float

Histone_ChIP-seq_ENCSR596BHN
Histone_ChIP-seq ENCSR596BHN [biosample_summary="Homo sapiens right cardiac atrium tissue male adult (34 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR596BHN [1.76, 14]
n
3,410,374
mean
4.41
sd
1.36

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 34103740.11% 12701
chr1 208125 0.08% 827
chr2 131375 0.05% 523
chr3 133180 0.07% 516
chr4 97821 0.05% 393
chr5 904280 0.50% 3470
chr6 83590 0.05% 350
chr7 157812 0.10% 596
chr8 148157 0.10% 573
chr9 91042 0.07% 358
chr10 105429 0.08% 417
chr11 96147 0.07% 378
chr12 153965 0.12% 570
chr13 54116 0.05% 211
chr14 60516 0.06% 255
chr15 105255 0.10% 296
chr16 117614 0.13% 426
chr17 62916 0.08% 243
chr18 37952 0.05% 158
chr19 475313 0.81% 1441
chr20 87389 0.14% 324
chr21 42302 0.09% 155
chr22 29406 0.06% 113
chrX 20277 0.01% 87
chrY 6395 0.01% 21
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 12701 140 4569 268.51 228
global segment-length histogram

Files

Filename Size md5
ENCFF253OXB.bed.gz 231.95 KB f7f8e5e5bbbacdc48de462aa1b91b1db
ENCFF253OXB.tabix.bed.gz 123.43 KB 847372579bde114799a1086cf31248ab
ENCFF253OXB.tabix.bed.gz.tbi 79.99 KB e5d29eb62c674ce4380c1c35dd606294
genomic_resource.yaml 1.53 KB 26f57bc958d99c127e24902d4f459e07
statistics/