Resource

Id Histone_ChIP-seq/ENCSR595IZXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR595IZX [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR595IZX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:41.655195+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR595IZX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR595IZX float

Histone_ChIP-seq_ENCSR595IZX
Histone_ChIP-seq ENCSR595IZX [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR595IZX [1.35, 27.8]
n
187,661,225
mean
5.95
sd
3.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1876612255.83% 233107
chr1 12750972 5.12% 16118
chr1_KI270706v1_random 20406 11.66% 30
chr1_KI270707v1_random 4366 13.63% 8
chr1_KI270708v1_random 39054 30.59% 46
chr1_KI270709v1_random 21034 31.46% 17
chr1_KI270710v1_random 3153 7.85% 8
chr1_KI270712v1_random 5753 3.27% 5
chr1_KI270713v1_random 1772 4.35% 3
chr1_KI270714v1_random 1954 4.68% 2
chr2 14250058 5.88% 18371
chr2_KI270716v1_random 8543 5.55% 2
chr3 11401596 5.75% 15263
chr3_GL000221v1_random 7811 5.03% 17
chr4 10641973 5.59% 13884
chr4_GL000008v2_random 13421 6.40% 15
chr5 11630104 6.41% 15034
chr5_GL000208v1_random 5044 5.44% 9
chr6 9451220 5.53% 12786
chr7 11719631 7.35% 13763
chr8 11564706 7.97% 13755
chr9 6958109 5.03% 9003
chr9_KI270719v1_random 8127 4.60% 14
chr9_KI270720v1_random 1406 3.60% 3
chr10 8918324 6.67% 11157
chr11 7249039 5.37% 9070
chr12 8538192 6.41% 10147
chr13 5829147 5.10% 8199
chr14 5471319 5.11% 6994
chr14_GL000009v2_random 16367 8.11% 26
chr14_GL000194v1_random 18298 9.56% 20
chr14_GL000225v1_random 139801 66.20% 122
chr14_KI270722v1_random 33611 17.32% 52
chr14_KI270723v1_random 6132 16.09% 7
chr14_KI270724v1_random 7179 18.15% 8
chr14_KI270725v1_random 9190 5.32% 15
chr14_KI270726v1_random 1201 2.75% 3
chr15 4927777 4.83% 6358
chr15_KI270727v1_random 1732 0.39% 4
chr16 4839671 5.36% 5583
chr16_KI270728v1_random 63849 3.41% 84
chr17 4144905 4.98% 4822
chr17_GL000205v2_random 11784 6.35% 20
chr17_KI270729v1_random 209743 74.68% 28
chr17_KI270730v1_random 35271 31.34% 23
chr18 4276737 5.32% 5727
chr19 9887792 16.87% 6975
chr20 3764470 5.84% 4710
chr21 3045881 6.52% 3626
chr22 2094842 4.12% 2486
chr22_KI270731v1_random 1355 0.90% 4
chr22_KI270732v1_random 4770 11.48% 4
chr22_KI270733v1_random 22995 12.79% 36
chr22_KI270734v1_random 547 0.33% 1
chr22_KI270735v1_random 6404 14.96% 6
chr22_KI270736v1_random 142594 78.38% 33
chr22_KI270737v1_random 70520 67.91% 41
chr22_KI270738v1_random 61014 61.40% 14
chr22_KI270739v1_random 451 0.61% 1
chrUn_GL000195v1 2265 1.24% 7
chrUn_GL000213v1 7518 4.58% 11
chrUn_GL000214v1 14930 10.84% 24
chrUn_GL000216v2 124219 70.34% 56
chrUn_GL000218v1 7791 4.83% 14
chrUn_GL000219v1 16055 8.96% 20
chrUn_GL000220v1 9889 6.11% 15
chrUn_GL000224v1 107121 59.61% 72
chrUn_KI270304v1 276 12.75% 1
chrUn_KI270310v1 252 20.98% 1
chrUn_KI270320v1 525 11.89% 1
chrUn_KI270322v1 1578 7.35% 5
chrUn_KI270330v1 788 47.70% 2
chrUn_KI270411v1 524 19.80% 1
chrUn_KI270435v1 18733 20.15% 36
chrUn_KI270438v1 71671 63.70% 22
chrUn_KI270442v1 148784 37.95% 79
chrUn_KI270448v1 261 3.27% 1
chrUn_KI270465v1 1539 86.75% 3
chrUn_KI270468v1 659 16.25% 2
chrUn_KI270508v1 1590 81.50% 3
chrUn_KI270509v1 1234 53.24% 3
chrUn_KI270512v1 10142 44.70% 10
chrUn_KI270515v1 686 10.78% 1
chrUn_KI270517v1 912 28.04% 1
chrUn_KI270518v1 1207 55.22% 2
chrUn_KI270519v1 46781 33.87% 57
chrUn_KI270521v1 770 10.08% 1
chrUn_KI270529v1 317 16.69% 1
chrUn_KI270530v1 254 11.72% 1
chrUn_KI270538v1 3246 3.55% 5
chrUn_KI270539v1 452 45.52% 1
chrUn_KI270579v1 500 1.61% 2
chrUn_KI270580v1 1319 84.93% 1
chrUn_KI270582v1 263 4.04% 1
chrUn_KI270583v1 644 46.00% 1
chrUn_KI270584v1 2601 57.63% 2
chrUn_KI270588v1 863 14.01% 3
chrUn_KI270589v1 5535 12.45% 6
chrUn_KI270590v1 1580 33.72% 2
chrUn_KI270591v1 998 17.22% 1
chrUn_KI270741v1 4619 2.93% 9
chrUn_KI270742v1 6036 3.23% 14
chrUn_KI270743v1 13756 6.53% 28
chrUn_KI270744v1 28454 16.89% 36
chrUn_KI270745v1 706 1.69% 1
chrUn_KI270746v1 302 0.45% 1
chrUn_KI270747v1 5109 2.57% 7
chrUn_KI270748v1 1198 1.28% 2
chrUn_KI270749v1 5395 3.40% 5
chrUn_KI270750v1 3501 2.35% 7
chrUn_KI270751v1 11346 7.53% 19
chrUn_KI270753v1 8368 13.29% 18
chrUn_KI270754v1 21412 53.28% 17
chrUn_KI270755v1 1018 2.77% 2
chrUn_KI270756v1 78132 98.17% 10
chrUn_KI270757v1 13238 18.58% 20
chrX 12159650 7.79% 17417
chrY 318596 0.56% 454
3249 contigs with no values (118269608 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 233107 250 100722 805.04 474
global segment-length histogram

Files

Filename Size md5
ENCFF249CFP.bed.gz 4.5 MB 7ed2a320a823d9627f1a2135ecc130c6
ENCFF249CFP.tabix.bed.gz 2.22 MB 0db5fa94da870a2829ec88e27f4d623b
ENCFF249CFP.tabix.bed.gz.tbi 543.52 KB 8aeb89571685f3e133de862e6e24ade4
genomic_resource.yaml 3.12 KB 5caca716dccb5c05d24d6239f7a15603
statistics/