Resource

Id Histone_ChIP-seq/ENCSR593KDJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR593KDJ [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR593KDJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006631/
  • biosample_summary: Homo sapiens right atrium auricular region tissue female adult (53 years)
  • date_created: 2016-10-19T23:15:32.920109+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR593KDJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR593KDJ float

Histone_ChIP-seq_ENCSR593KDJ
Histone_ChIP-seq ENCSR593KDJ [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR593KDJ [1.58, 76.2]
n
135,572,853
mean
15
sd
10.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1355728534.21% 75634
chr1 13651557 5.48% 7391
chr2 10294221 4.25% 5977
chr3 9506315 4.79% 5114
chr4 6339209 3.33% 3524
chr5 7550055 4.16% 4233
chr6 7489700 4.38% 4354
chr7 6255340 3.93% 3528
chr8 5715019 3.94% 3346
chr9 5773498 4.17% 3229
chr10 7578626 5.66% 4042
chr11 6762377 5.01% 3782
chr12 7172890 5.38% 3838
chr13 3275003 2.86% 1959
chr14 4294426 4.01% 2339
chr15 5181383 5.08% 2828
chr16 4132928 4.57% 2481
chr17 6428612 7.72% 3437
chr18 3027294 3.77% 1696
chr19 4579348 7.81% 2446
chr20 3462052 5.37% 1913
chr21 1442996 3.09% 898
chr22 3196451 6.29% 1624
chrM 13188 79.59% 6
chrX 2450365 1.57% 1649
3342 contigs with no values (186287931 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 75634 235 66625 1792.49 1204
global segment-length histogram

Files

Filename Size md5
ENCFF159NYF.bed.gz 1.88 MB 4e07d34582889e0906fe5edc863387d6
ENCFF159NYF.tabix.bed.gz 844.21 KB 1e47dbab625e0b90bf7bab5edd490925
ENCFF159NYF.tabix.bed.gz.tbi 248.44 KB 0a1666773ccd5977ca0bf94cc8b98762
genomic_resource.yaml 1.57 KB d2795adf7744d7a355f313566d640c58
statistics/