Resource

Id Histone_ChIP-seq/ENCSR590AJVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR590AJV [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR590AJV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female child (16 years)
  • date_created: 2022-05-11T01:54:21.318667+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR590AJV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR590AJV float

Histone_ChIP-seq_ENCSR590AJV
Histone_ChIP-seq ENCSR590AJV [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR590AJV [1.49, 6.67]
n
6,706,211
mean
3.39
sd
0.741

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 67062110.21% 9312
chr1 337724 0.14% 539
chr2 346956 0.14% 533
chr3 244239 0.12% 413
chr4 318237 0.17% 458
chr5 335611 0.18% 517
chr6 200052 0.12% 344
chr7 330923 0.21% 479
chr8 304416 0.21% 453
chr9 235682 0.17% 321
chr10 209932 0.16% 314
chr11 265243 0.20% 421
chr12 416254 0.31% 554
chr13 85206 0.07% 165
chr14 98506 0.09% 177
chr15 128304 0.13% 193
chr16 254048 0.28% 313
chr17 137172 0.16% 206
chr18 100177 0.12% 151
chr19 1882604 3.21% 1928
chr20 80803 0.13% 125
chr21 82277 0.18% 131
chr22 44564 0.09% 85
chrX 267281 0.17% 492
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9312 195 9264 720.17 552
global segment-length histogram

Files

Filename Size md5
ENCFF041FQE.bed.gz 186.28 KB 403f747be20ac8971cafb55faf5173db
ENCFF041FQE.tabix.bed.gz 96.32 KB 6c47f4073b306ca3551143a6d019483f
ENCFF041FQE.tabix.bed.gz.tbi 58.74 KB 6c3b616f462721f8b79d2eddf7b18f4a
genomic_resource.yaml 1.53 KB 40277aee4b04afe379268530d95d6d1e
statistics/